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ALOX12 arachidonate 12-lipoxygenase, 12S type [ Pan troglodytes (chimpanzee) ]

Gene ID: 455242, updated on 29-Mar-2024

Summary

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Official Symbol
ALOX12provided by VGNC
Official Full Name
arachidonate 12-lipoxygenase, 12S typeprovided by VGNC
Primary source
VGNC:VGNC:12026
Locus tag
CK820_G0036857
See related
Ensembl:ENSPTRG00000008653
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ALOX12 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (17507260..17521776)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (15746756..15761272)

Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene transcription factor Spi-C-like Neighboring gene BTB/POZ domain-containing protein KCTD9-like Neighboring gene polyunsaturated fatty acid (12S)/(13S)-lipoxygenase, epidermal-type-like Neighboring gene uncharacterized LOC107969129 Neighboring gene chromosome 17 C17orf49 homolog Neighboring gene ribonuclease K

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate 12(S)-lipoxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables arachidonate 15-lipoxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables linoleate 13S-lipoxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arachidonic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hepoxilin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in linoleic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipoxygenase pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arachidonate 12-lipoxygenase, 12S-type; polyunsaturated fatty acid lipoxygenase ALOX12
XP_016786880.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    17507260..17521776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016931391.3 → XP_016786880.2  polyunsaturated fatty acid lipoxygenase ALOX12

Nucleotide Protein
Heading Accession and Version

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