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ALOX15B arachidonate 15-lipoxygenase type B [ Pan troglodytes (chimpanzee) ]

Gene ID: 455104, updated on 29-Mar-2024

Summary

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Official Symbol
ALOX15Bprovided by VGNC
Official Full Name
arachidonate 15-lipoxygenase type Bprovided by VGNC
Primary source
VGNC:VGNC:9150
Locus tag
CK820_G0021076
See related
Ensembl:ENSPTRG00000008721
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (62660082..62670199, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (60844537..60854670, complement)

Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene arachidonate 12-lipoxygenase, 12R type Neighboring gene uncharacterized LOC112206018 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC107969264

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate 15-lipoxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arachidonic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hepoxilin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in linoleic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipoxygenase pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arachidonate 15-lipoxygenase B; polyunsaturated fatty acid lipoxygenase ALOX15B
Names
arachidonate 15-lipoxygenase, second type
XP_016787960.2
XP_016787961.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    62660082..62670199 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016932472.4 → XP_016787961.2  polyunsaturated fatty acid lipoxygenase ALOX15B isoform X2

    UniProtKB/TrEMBL
    A0A2J8MGD1, H2R1W2
    Conserved Domains (2) summary
    cd01753
    Location:2 → 121
    PLAT_LOX; PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and ...
    cl27717
    Location:232 → 647
    Lipoxygenase

  2. XM_016932471.4 → XP_016787960.2  polyunsaturated fatty acid lipoxygenase ALOX15B isoform X1

    UniProtKB/TrEMBL
    A0A2J8MGE1, H2QC67, K7B382
    Conserved Domains (2) summary
    cd01753
    Location:2 → 121
    PLAT_LOX; PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and ...
    cl27717
    Location:204 → 667
    Lipoxygenase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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