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PLD2 phospholipase D2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 454454, updated on 29-Mar-2024

Summary

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Official Symbol
PLD2provided by VGNC
Official Full Name
phospholipase D2provided by VGNC
Primary source
VGNC:VGNC:9528
Locus tag
CK820_G0036934
See related
Ensembl:ENSPTRG00000008610
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (15322142..15338463)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (13561651..13577959)

Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene chromosome 19 C17orf114 homolog Neighboring gene proteasome 20S subunit beta 6 Neighboring gene misshapen like kinase 1 Neighboring gene chromosome 17 C17orf107 homolog Neighboring gene cholinergic receptor nicotinic epsilon subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase D2
XP_016786773.1
XP_063655578.1
XP_063655579.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    15322142..15338463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016931284.4 → XP_016786773.1  phospholipase D2 isoform X2

    UniProtKB/TrEMBL
    A0A2J8KQP8, A0A2J8KQR2, A0A6D2WCR5, H2QBY9, K7BNT4
    Conserved Domains (1) summary
    cl26365
    Location:66 → 918
    PLN03008; Phospholipase D delta

  2. XM_063799508.1 → XP_063655578.1  phospholipase D2 isoform X1

  3. XM_063799509.1 → XP_063655579.1  phospholipase D2 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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