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POLR2C RNA polymerase II subunit C [ Pan troglodytes (chimpanzee) ]

Gene ID: 454119, updated on 29-Mar-2024

Summary

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Official Symbol
POLR2Cprovided by VGNC
Official Full Name
RNA polymerase II subunit Cprovided by VGNC
Primary source
VGNC:VGNC:8993
Locus tag
CK820_G0016591
See related
Ensembl:ENSPTRG00000008157
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
DOK4
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 18 NC_072416.2 (55461299..55470916)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 16 NC_072414.1 (55461383..55470814)

Chromosome 18 - NC_072416.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104002633 Neighboring gene C-C motif chemokine ligand 17 Neighboring gene cytokine induced apoptosis inhibitor 1 Neighboring gene coenzyme Q9 Neighboring gene docking protein 4 Neighboring gene coiled-coil domain containing 102A Neighboring gene adhesion G protein-coupled receptor G5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase II subunit RPB3
Names
DNA directed RNA polymerase II polypeptide C
docking protein 4
polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
polymerase (RNA) II subunit C
XP_001148305.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    55461299..55470916
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001148305.8 → XP_001148305.1  DNA-directed RNA polymerase II subunit RPB3

    See identical proteins and their annotated locations for XP_001148305.1

    UniProtKB/TrEMBL
    A0A2I3TCU0, A0A2J8MW49, A0A6D2VWK7, H2QB71
    Related
    ENSPTRP00000013927.3
    Conserved Domains (1) summary
    cd07031
    Location:7 → 266
    RNAP_II_RPB3; RPB3 subunit of Eukaryotic RNA polymerase II
Nucleotide Protein
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