ITGA11 integrin subunit alpha 11 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: ITGA11provided by VGNC
Official Full Name: integrin subunit alpha 11provided by VGNC
Primary source: VGNC:VGNC:3542
Locus tag: CK820_G0008211
See related: Ensembl:ENSPTRG00000007215
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 15

Exon count:: 30

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	16	NC_072414.2 (60303006..60433088, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	15	NC_072413.1 (60277860..60407769, complement)

Chromosome 16 - NC_072414.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Markers

SHGC-147691 (e-PCR)
- UniSTS:172859

SHGC-57393 (e-PCR)
- UniSTS:20284

D15S983 (e-PCR), detects polymorphism
- UniSTS:68231

ITGA11_2690 (e-PCR)
- UniSTS:471468

SHGC-85354 (e-PCR)
- UniSTS:104883

RH102890 (e-PCR)
- UniSTS:97224

STS-H15811 (e-PCR)
- UniSTS:31741

SHGC-150911 (e-PCR)
- UniSTS:173565

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables integrin binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in cell adhesion mediated by integrin	IEA Inferred from Electronic Annotation more info	PubMed
involved_in cell-cell adhesion	IEA Inferred from Electronic Annotation more info	PubMed
involved_in cell-matrix adhesion	IEA Inferred from Electronic Annotation more info	PubMed
involved_in integrin-mediated signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in external side of plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed
part_of integrin complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: integrin alpha-11

Names: integrin, alpha 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072414.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

60303006..60433088 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_510503.8 → XP_510503.3 integrin alpha-11

See identical proteins and their annotated locations for XP_510503.3

UniProtKB/TrEMBL

A0A2I3SLR9, A0A2J8NQW8, A0A2J8NQX5, A0A6D2W1M8

Related

ENSPTRP00000077910.1

Conserved Domains (3) summary

smart00191
Location:538 → 592

Int_alpha; Integrin alpha (beta-propellor repeats)

cd01469
Location:163 → 341

vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...

pfam08441
Location:635 → 1034

Integrin_alpha2; Integrin alpha