PRKD1 protein kinase D1 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: PRKD1provided by VGNC
Official Full Name: protein kinase D1provided by VGNC
Primary source: VGNC:VGNC:3353
Locus tag: CK820_G0029779
See related: Ensembl:ENSPTRG00000006232
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 14

Exon count:: 20

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	15	NC_072413.2 (27821984..28175218, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	14	NC_072412.1 (21065724..21419035, complement)

Chromosome 15 - NC_072413.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

SGC32910 (e-PCR)
- UniSTS:32269

G59832 (e-PCR)
- UniSTS:136981

RH119606 (e-PCR)
- UniSTS:133921

STS-X75756 (e-PCR)
- UniSTS:47916

SHGC-78965 (e-PCR)
- UniSTS:100910

UniSTS:224841 (e-PCR)
- UniSTS:224841

G17809 (e-PCR)
- UniSTS:12619

PRKCM_228 (e-PCR)
- UniSTS:277616

MARC_14413-14414:1010075307:1 (e-PCR)
- UniSTS:267659

RH47598 (e-PCR)
- UniSTS:59790

SHGC-106490 (e-PCR)
- UniSTS:169872

D14S1146 (e-PCR)
- UniSTS:57232

SHGC-145033 (e-PCR)
- UniSTS:172509

SHGC-84782 (e-PCR)
- UniSTS:104158

SHGC-78912 (e-PCR)
- UniSTS:100857

RH121759 (e-PCR)
- UniSTS:134909

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables protein serine/threonine kinase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in protein phosphorylation	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: serine/threonine-protein kinase D1

XP_016781439.2

EC 2.7.11.13

XP_024204457.1

EC 2.7.11.13

XP_024204458.1

EC 2.7.11.13

XP_063648895.1

EC 2.7.11.13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072413.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

27821984..28175218 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_016925950.4 → XP_016781439.2 serine/threonine-protein kinase D1 isoform X2

UniProtKB/TrEMBL

A0A2J8QKV7, A0A8I3B2A1, H2Q845, K7A935, K7BPN6

Conserved Domains (4) summary

cd01239
Location:416 → 543

PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain

cd14082
Location:579 → 838

STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D

cd20839
Location:140 → 211

C1_PKD1_rpt1; first protein kinase C conserved region 1 (C1 domain) found in protein kinase D (PKD) and similar proteins

cd20842
Location:237 → 330

C1_PKD1_rpt2; second protein kinase C conserved region 1 (C1 domain) found in protein kinase D (PKD) and similar proteins
XM_024348689.3 → XP_024204457.1 serine/threonine-protein kinase D1 isoform X1

UniProtKB/TrEMBL

A0A2J8QKX5, H2Q845

Conserved Domains (4) summary

cd01239
Location:424 → 551

PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain

cd14082
Location:587 → 846

STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D

cd20839
Location:140 → 211

C1_PKD1_rpt1; first protein kinase C conserved region 1 (C1 domain) found in protein kinase D (PKD) and similar proteins

cd20842
Location:245 → 338

C1_PKD1_rpt2; second protein kinase C conserved region 1 (C1 domain) found in protein kinase D (PKD) and similar proteins
XM_063792825.1 → XP_063648895.1 serine/threonine-protein kinase D1 isoform X4
XM_024348690.3 → XP_024204458.1 serine/threonine-protein kinase D1 isoform X3

UniProtKB/TrEMBL

A0A2I3TRJ7

Conserved Domains (4) summary

cd01239
Location:328 → 455

PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain

cd14082
Location:491 → 750

STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D

cd20839
Location:44 → 115

C1_PKD1_rpt1; first protein kinase C conserved region 1 (C1 domain) found in protein kinase D (PKD) and similar proteins

cd20842
Location:149 → 242

C1_PKD1_rpt2; second protein kinase C conserved region 1 (C1 domain) found in protein kinase D (PKD) and similar proteins