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PTPRR protein tyrosine phosphatase receptor type R [ Pan troglodytes (chimpanzee) ]

Gene ID: 452076, updated on 3-Apr-2024

Summary

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Official Symbol
PTPRRprovided by VGNC
Official Full Name
protein tyrosine phosphatase receptor type Rprovided by VGNC
Primary source
VGNC:VGNC:8507
Locus tag
CK820_G0041444
See related
Ensembl:ENSPTRG00000005221
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 10 NC_072408.2 (77373007..77656040, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (75990432..76273274, complement)

Chromosome 10 - NC_072408.2Genomic Context describing neighboring genes Neighboring gene potassium calcium-activated channel subfamily M regulatory beta subunit 4 Neighboring gene uncharacterized LOC107967570 Neighboring gene protein tyrosine phosphatase receptor type B Neighboring gene fumarylacetoacetate hydrolase domain-containing protein 2B-like Neighboring gene uncharacterized LOC107967572 Neighboring gene uncharacterized LOC107967573 Neighboring gene tetraspanin 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-tyrosine dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase R
XP_009424115.2
XP_016779340.1
XP_054519379.1
XP_054519380.1
XP_509221.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    77373007..77656040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_509221.8 → XP_509221.2  receptor-type tyrosine-protein phosphatase R isoform X1

    UniProtKB/TrEMBL
    A0A2I3RBR5, A0A2J8K4G5, A0A6D2WML1
    Related
    ENSPTRP00000062058.1
    Conserved Domains (1) summary
    cd00047
    Location:417 → 644
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  2. XM_054663404.2 → XP_054519379.1  receptor-type tyrosine-protein phosphatase R isoform X3

  3. XM_009425840.5 → XP_009424115.2  receptor-type tyrosine-protein phosphatase R isoform X4

    UniProtKB/TrEMBL
    A0A2J8K4K0, A0A6D2WHF6, H2Q6G7
    Related
    ENSPTRP00000008870.4
    Conserved Domains (1) summary
    cd14611
    Location:305 → 530
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

  4. XM_054663405.2 → XP_054519380.1  receptor-type tyrosine-protein phosphatase R isoform X5

    UniProtKB/TrEMBL
    A0A2I3TA80, A0A2J8K4H2, A0A6D2VTN2

  5. XM_016923851.4 → XP_016779340.1  receptor-type tyrosine-protein phosphatase R isoform X2

RNA

  1. XR_010148362.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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