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ITGA7 integrin subunit alpha 7 [ Pan troglodytes (chimpanzee) ]

Gene ID: 451967, updated on 3-Apr-2024

Summary

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Official Symbol
ITGA7provided by VGNC
Official Full Name
integrin subunit alpha 7provided by VGNC
Primary source
VGNC:VGNC:5436
Locus tag
CK820_G0046558
See related
Ensembl:ENSPTRG00000005059
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ITGA7 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 10 NC_072408.2 (40295621..40326876)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (38969577..39000785)

Chromosome 10 - NC_072408.2Genomic Context describing neighboring genes Neighboring gene CD63 molecule Neighboring gene retinol dehydrogenase 5 Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 1 Neighboring gene thiol methyltransferase 1B Neighboring gene proteasome subunit beta type-3-like Neighboring gene uncharacterized LOC129136634 Neighboring gene olfactory receptor 10P1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-7
Names
integrin, alpha 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    40295621..40326876
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063786642.1 → XP_063642712.1  integrin alpha-7 isoform X9

  2. XM_009425185.5 → XP_009423460.3  integrin alpha-7 isoform X7

  3. XM_054663219.2 → XP_054519194.1  integrin alpha-7 isoform X9

  4. XM_063786649.1 → XP_063642719.1  integrin alpha-7 isoform X13

  5. XM_054663220.2 → XP_054519195.1  integrin alpha-7 isoform X13

  6. XM_063786643.1 → XP_063642713.1  integrin alpha-7 isoform X10

  7. XM_063786645.1 → XP_063642715.1  integrin alpha-7 isoform X12

  8. XM_009425191.5 → XP_009423466.3  integrin alpha-7 isoform X12

  9. XM_063786650.1 → XP_063642720.1  integrin alpha-7 isoform X13

  10. XM_054663218.2 → XP_054519193.1  integrin alpha-7 isoform X7

  11. XM_063786644.1 → XP_063642714.1  integrin alpha-7 isoform X11

  12. XM_063786648.1 → XP_063642718.1  integrin alpha-7 isoform X13

  13. XM_063786647.1 → XP_063642717.1  integrin alpha-7 isoform X13

  14. XM_063786646.1 → XP_063642716.1  integrin alpha-7 isoform X13

  15. XM_063786653.1 → XP_063642723.1  integrin alpha-7 isoform X14

  16. XM_009425189.5 → XP_009423464.3  integrin alpha-7 isoform X10

  17. XM_063786641.1 → XP_063642711.1  integrin alpha-7 isoform X8

  18. XM_003313609.6 → XP_003313657.3  integrin alpha-7 isoform X15

    UniProtKB/TrEMBL
    A0A2I3SVP6

  19. XM_054663217.2 → XP_054519192.1  integrin alpha-7 isoform X7

  20. XM_009425181.5 → XP_009423456.3  integrin alpha-7 isoform X1

    UniProtKB/TrEMBL
    H2Q659

  21. XM_003313608.7 → XP_003313656.3  integrin alpha-7 isoform X3

    UniProtKB/TrEMBL
    K7B8C0

  22. XM_003313607.6 → XP_003313655.3  integrin alpha-7 isoform X4

    UniProtKB/TrEMBL
    K7B9H3

  23. XM_009425183.5 → XP_009423458.1  integrin alpha-7 isoform X5

    UniProtKB/TrEMBL
    A0A2J8Q159
    Conserved Domains (2) summary
    smart00191
    Location:422 → 473
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam08441
    Location:515 → 1006
    Integrin_alpha2; Integrin alpha

  24. XM_009425184.5 → XP_009423459.1  integrin alpha-7 isoform X6

    UniProtKB/TrEMBL
    A0A2J8Q159
    Conserved Domains (2) summary
    smart00191
    Location:422 → 473
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam08441
    Location:515 → 1006
    Integrin_alpha2; Integrin alpha

  25. XM_009425182.5 → XP_009423457.1  integrin alpha-7 isoform X2

    UniProtKB/TrEMBL
    A0A2J8Q159
    Conserved Domains (2) summary
    smart00191
    Location:422 → 473
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam08441
    Location:515 → 1006
    Integrin_alpha2; Integrin alpha

  26. XM_063786652.1 → XP_063642722.1  integrin alpha-7 isoform X13

  27. XM_063786651.1 → XP_063642721.1  integrin alpha-7 isoform X13

  28. XM_063786654.1 → XP_063642724.1  integrin alpha-7 isoform X14

Nucleotide Protein
Heading Accession and Version

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