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ITGA5 integrin subunit alpha 5 [ Pan troglodytes (chimpanzee) ]

Gene ID: 451958, updated on 29-Mar-2024

Summary

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Official Symbol
ITGA5provided by VGNC
Official Full Name
integrin subunit alpha 5provided by VGNC
Primary source
VGNC:VGNC:5435
Locus tag
CK820_G0046519
See related
Ensembl:ENSPTRG00000005040
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ITGA5 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 10 NC_072408.2 (41433647..41457689)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (40107943..40131976)

Chromosome 10 - NC_072408.2Genomic Context describing neighboring genes Neighboring gene NCK associated protein 1 like Neighboring gene gametocyte specific factor 1 Neighboring gene zinc finger protein 385A Neighboring gene G protein-coupled receptor 84

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-5
Names
integrin, alpha 5 (fibronectin receptor, alpha polypeptide)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    41433647..41457689
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016923272.4 → XP_016778761.1  integrin alpha-5 isoform X1

    UniProtKB/TrEMBL
    A0A2J8Q0X5, H2Q644
    Related
    ENSPTRP00000008580.6

  2. XM_016923274.4 → XP_016778763.1  integrin alpha-5 isoform X2

    UniProtKB/TrEMBL
    A0A2J8Q0X5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials
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