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RARG retinoic acid receptor gamma [ Pan troglodytes (chimpanzee) ]

Gene ID: 451935, updated on 3-Apr-2024

Summary

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Official Symbol
RARGprovided by VGNC
Official Full Name
retinoic acid receptor gammaprovided by VGNC
Primary source
VGNC:VGNC:8514
Locus tag
CK820_G0039544
See related
Ensembl:ENSPTRG00000005007
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See RARG in Genome Data Viewer
Location:
chromosome: 12
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 10 NC_072408.2 (42634221..42655841)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (41308119..41329741)

Chromosome 10 - NC_072408.2Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 5 Neighboring gene sperm mitochondrial-associated cysteine-rich protein Neighboring gene integrin subunit beta 7 Neighboring gene zinc finger protein 740 Neighboring gene cysteine sulfinic acid decarboxylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear glucocorticoid receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to corticotropin-releasing hormone stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinoic acid receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinoic acid receptor gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    42634221..42655841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_509094.9 → XP_509094.5  retinoic acid receptor gamma isoform X2

    UniProtKB/TrEMBL
    A0A2J8KD77, A0A6D2W426, H2Q616

  2. XM_054664220.2 → XP_054520195.1  retinoic acid receptor gamma isoform X2

    UniProtKB/TrEMBL
    A0A2J8KD77, A0A6D2W426, H2Q616

  3. XM_054664222.2 → XP_054520197.1  retinoic acid receptor gamma isoform X4

    UniProtKB/TrEMBL
    A0A2J8KDA2

  4. XM_063785606.1 → XP_063641676.1  retinoic acid receptor gamma isoform X1

  5. XM_054664223.2 → XP_054520198.1  retinoic acid receptor gamma isoform X4

    UniProtKB/TrEMBL
    A0A2J8KDA2

  6. XM_054664221.2 → XP_054520196.1  retinoic acid receptor gamma isoform X3

    UniProtKB/TrEMBL
    A0A2J8KD73, A0A6D2WRR4, K7CVN2

  7. XM_054664224.2 → XP_054520199.1  retinoic acid receptor gamma isoform X5

    UniProtKB/TrEMBL
    A0A2I3T9P0, A0A2J8KD66, A0A6D2WNX9

RNA

  1. XR_010148023.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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