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MMP3 matrix metallopeptidase 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 451511, updated on 29-Mar-2024

Summary

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Official Symbol
MMP3provided by VGNC
Official Full Name
matrix metallopeptidase 3provided by VGNC
Primary source
VGNC:VGNC:1102
Locus tag
CK820_G0031072
See related
Ensembl:ENSPTRG00000004220
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
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Genomic context

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Location:
chromosome: 11
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (104887177..104895086, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (104116402..104124317, complement)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene matrix metallopeptidase 1 Neighboring gene casein kinase I-like Neighboring gene matrix metallopeptidase 12 Neighboring gene bolA-like protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stromelysin-1
Names
matrix metallopeptidase 3 (stromelysin 1, progelatinase)
matrix metalloproteinase 3
XP_508723.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    104887177..104895086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_508723.5 → XP_508723.2  stromelysin-1

    See identical proteins and their annotated locations for XP_508723.2

    UniProtKB/TrEMBL
    A0A2J8LBN1, A0A6D2XRZ0, H2Q4N2, K7DE67
    Related
    ENSPTRP00000007260.2
    Conserved Domains (3) summary
    cd00094
    Location:287 → 477
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    pfam00413
    Location:108 → 264
    Peptidase_M10; Matrixin
    pfam01471
    Location:33 → 87
    PG_binding_1; Putative peptidoglycan binding domain
Nucleotide Protein
Heading Accession and Version

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