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KAT5 lysine acetyltransferase 5 [ Pan troglodytes (chimpanzee) ]

Gene ID: 451329, updated on 29-Mar-2024

Summary

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Official Symbol
KAT5provided by VGNC
Official Full Name
lysine acetyltransferase 5provided by VGNC
Primary source
VGNC:VGNC:7650
Locus tag
CK820_G0033927
See related
Ensembl:ENSPTRG00000003890
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
HTATIP
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (68038116..68046127)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (67142856..67151619)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene RELA proto-oncogene, NF-kB subunit Neighboring gene uncharacterized LOC107967119 Neighboring gene ribonuclease H2 subunit C Neighboring gene keratin, type II cytoskeletal 8-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H4K16 acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MSL complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone acetyltransferase KAT5
Names
HIV-1 Tat interacting protein, 60kDa
HIV-1 Tat interactive protein, 60kDa
K(lysine) acetyltransferase 5
histone acetyltransferase HTATIP
XP_001170117.1
XP_001170139.1
XP_009421768.1
XP_009421769.1
XP_009421770.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    68038116..68046127
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001170139.7 → XP_001170139.1  histone acetyltransferase KAT5 isoform X5

    See identical proteins and their annotated locations for XP_001170139.1

    UniProtKB/TrEMBL
    A0A2I3S3R0, A0A2J8QBV8, A0A6D2XZV4, G2HH64
    Related
    ENSPTRP00000086973.1
    Conserved Domains (2) summary
    PLN00104
    Location:43 → 452
    PLN00104; MYST -like histone acetyltransferase; Provisional
    pfam11717
    Location:7 → 65
    Tudor-knot; RNA binding activity-knot of a chromodomain

  2. XM_001170117.7 → XP_001170117.1  histone acetyltransferase KAT5 isoform X3

    See identical proteins and their annotated locations for XP_001170117.1

    UniProtKB/TrEMBL
    A0A2I3S3R0, A0A2J8QBU7, A0A6D2XV38, H2Q441, K7BDV3
    Related
    ENSPTRP00000006709.5
    Conserved Domains (2) summary
    PLN00104
    Location:43 → 504
    PLN00104; MYST -like histone acetyltransferase; Provisional
    pfam11717
    Location:7 → 65
    Tudor-knot; RNA binding activity-knot of a chromodomain

  3. XM_009423494.3 → XP_009421769.1  histone acetyltransferase KAT5 isoform X2

    See identical proteins and their annotated locations for XP_009421769.1

    UniProtKB/TrEMBL
    A0A2I3S3R0
    Conserved Domains (2) summary
    PLN00104
    Location:43 → 513
    PLN00104; MYST -like histone acetyltransferase; Provisional
    pfam11717
    Location:7 → 65
    Tudor-knot; RNA binding activity-knot of a chromodomain

  4. XM_009423493.4 → XP_009421768.1  histone acetyltransferase KAT5 isoform X1

    UniProtKB/TrEMBL
    A0A2I3S3R0, A0A2J8QBT9
    Related
    ENSPTRP00000071645.1
    Conserved Domains (2) summary
    pfam11717
    Location:40 → 98
    Tudor-knot; RNA binding activity-knot of a chromodomain
    cl27485
    Location:76 → 537
    MOZ_SAS; MOZ/SAS family

  5. XM_009423495.4 → XP_009421770.1  histone acetyltransferase KAT5 isoform X4

    UniProtKB/TrEMBL
    A0A2I3S3R0, A0A2J8QBU5
    Conserved Domains (2) summary
    pfam11717
    Location:40 → 98
    Tudor-knot; RNA binding activity-knot of a chromodomain
    cl27485
    Location:76 → 485
    MOZ_SAS; MOZ/SAS family
Nucleotide Protein
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