U.S. flag

An official website of the United States government

APOE apolipoprotein E [ Pan troglodytes (chimpanzee) ]

Gene ID: 449586, updated on 17-Aug-2024

Summary

Official Symbol
APOEprovided by VGNC
Official Full Name
apolipoprotein Eprovided by VGNC
Primary source
VGNC:VGNC:57935
Locus tag
CK820_G0049411
See related
Ensembl:ENSPTRG00000011127
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See APOE in Genome Data Viewer
Location:
chromosome: 20
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 20 NC_072418.2 (47862141..47865637)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 19 NC_072417.1 (47862165..47865661)

Chromosome 20 - NC_072418.2Genomic Context describing neighboring genes Neighboring gene nectin cell adhesion molecule 2 Neighboring gene translocase of outer mitochondrial membrane 40 Neighboring gene apolipoprotein C1 Neighboring gene Apolipoprotein C-I, acidic form

Genomic regions, transcripts, and products

Bibliography

Pathways from PubChem

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular region PubMed 
part_of intermediate-density lipoprotein particle PubMed 

General protein information

Preferred Names
apolipoprotein E
Names
apo-E

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001009007.1NP_001009007.1  apolipoprotein E precursor

    See identical proteins and their annotated locations for NP_001009007.1

    Status: PROVISIONAL

    Source sequence(s)
    AF261280
    UniProtKB/Swiss-Prot
    Q9GJU3
    UniProtKB/TrEMBL
    A0A2J8PYB7, A0A663D5I0, K7C0I2, K7DW93
    Related
    ENSPTRP00000054411.3, ENSPTRT00000061867.3
    Conserved Domains (1) summary
    pfam01442
    Location:86273
    Apolipoprotein; Apolipoprotein A1/A4/E domain

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    47862141..47865637
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
External link. Please review our privacy policy.