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CG6695 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42937, updated on 10-May-2024

Summary

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Official Symbol
CG6695provided by FlyBase
Primary source
FLYBASE:FBgn0039215
Locus tag
Dmel_CG6695
See related
AllianceGenome:FB:FBgn0039215
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG6695
Summary
Is expressed in several structures, including embryonic/larval midgut; gastrula embryo; hindgut proper primordium; and presumptive embryonic/larval digestive system. Orthologous to human CLASRP (CLK4 associating serine/arginine rich protein). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

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Location:
96A14-96A14; 3-85 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (24655160..24659379)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (20480882..20485101)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene puffyeye Neighboring gene absent, small, or homeotic discs 2 Neighboring gene uncharacterized protein Neighboring gene mir-1003 stem loop Neighboring gene uncharacterized protein Neighboring gene Protoporphyrinogen oxidase Neighboring gene slowpoke

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila. Okamura K, et al. Cell, 2007 Jul 13. PMID 17599402, Free PMC Article
  2. Combinatorial control of Drosophila circular RNA expression by intronic repeats, hnRNPs, and SR proteins. Kramer MC, et al. Genes Dev, 2015 Oct 15. PMID 26450910, Free PMC Article
  3. Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans. Chung WJ, et al. Genome Res, 2011 Feb. PMID 21177960, Free PMC Article
  4. Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster. Zdobnov EM, et al. Science, 2002 Oct 4. PMID 12364792
  5. The nonspecific lethal complex is a transcriptional regulator in Drosophila. Raja SJ, et al. Mol Cell, 2010 Jun 25. PMID 20620954

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG6695-PA
CG6695-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    24655160..24659379
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_143019.3 → NP_651276.2  uncharacterized protein Dmel_CG6695, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651276.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MT15, Q9VC54
    Related
    FBpp0088855
    Conserved Domains (1) summary
    pfam09750
    Location:41 → 174
    DRY_EERY; Alternative splicing regulator

  2. NM_206565.2 → NP_996288.1  uncharacterized protein Dmel_CG6695, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_996288.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7KS14
    Conserved Domains (1) summary
    pfam09750
    Location:41 → 174
    DRY_EERY; Alternative splicing regulator
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7KS14 Q7KS14
Q9VC54 Q9VC54

Gene LinkOut

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