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POLR1D RNA polymerase I subunit D [ Gallus gallus (chicken) ]

Gene ID: 428713, updated on 19-Sep-2023

Summary

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Symbol
POLR1Dprovided by CGNC
Full Name
RNA polymerase I subunit Dprovided by CGNC
Primary source
CGNC:53441
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (11129269..11135411, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (11162927..11169064, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107052075 Neighboring gene endothelin receptor B subtype 2 Neighboring gene vesicle associated membrane protein 7 Neighboring gene SLAIN motif-containing protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression analysis of cytosolic DNA-sensing pathway genes in the intestinal mucosal layer of necrotic enteritis-induced chicken. Rengaraj D, et al. Vet Immunol Immunopathol, 2016 Feb. PMID 26872625

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerases I and III subunit RPAC2
Names
RNA polymerase I and III subunit D
polymerase (RNA) I polypeptide D, 16kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    11129269..11135411 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_426271.8 → XP_426271.2  DNA-directed RNA polymerases I and III subunit RPAC2 isoform X2

    UniProtKB/TrEMBL
    E1C277
    Conserved Domains (1) summary
    cd07029
    Location:14 → 98
    RNAP_I_III_AC19; AC19 subunit of Eukaryotic RNA polymerase (RNAP) I and RNAP III

  2. XM_046940706.1 → XP_046796662.1  DNA-directed RNA polymerases I and III subunit RPAC2 isoform X1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    11162927..11169064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040669832.2 → XP_040525766.1  DNA-directed RNA polymerases I and III subunit RPAC2 isoform X2

    Conserved Domains (1) summary
    cd07029
    Location:14 → 98
    RNAP_I_III_AC19; AC19 subunit of Eukaryotic RNA polymerase (RNAP) I and RNAP III

  2. XM_046916971.1 → XP_046772927.1  DNA-directed RNA polymerases I and III subunit RPAC2 isoform X1

Nucleotide Protein
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