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HIVEP3 HIVEP zinc finger 3 [ Gallus gallus (chicken) ]

Gene ID: 428208, updated on 5-Mar-2024

Summary

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Symbol
HIVEP3provided by CGNC
Full Name
HIVEP zinc finger 3provided by CGNC
Primary source
CGNC:53294
See related
Ensembl:ENSGALG00010015050
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 23
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 23 NC_052554.1 (1079261..1296431)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 23 NC_052595.1 (845952..1063447)

Chromosome 23 - NC_052554.1Genomic Context describing neighboring genes Neighboring gene serine incorporator 2 Neighboring gene uncharacterized LOC121107495 Neighboring gene uncharacterized LOC121107496 Neighboring gene endothelin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor HIVEP3
Names
human immunodeficiency virus type I enhancer binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1079261..1296431
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004947684.5 → XP_004947741.1  transcription factor HIVEP3 isoform X1

    See identical proteins and their annotated locations for XP_004947741.1

    UniProtKB/TrEMBL
    R4GH84
    Conserved Domains (6) summary
    smart00451
    Location:1797 → 1831
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1974 → 2378
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:193 → 213
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1774 → 1794
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1772 → 1794
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:206 → 230
    zf-H2C2_2; Zinc-finger double domain

  2. XM_004947682.5 → XP_004947739.1  transcription factor HIVEP3 isoform X1

    See identical proteins and their annotated locations for XP_004947739.1

    UniProtKB/TrEMBL
    R4GH84
    Conserved Domains (6) summary
    smart00451
    Location:1797 → 1831
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1974 → 2378
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:193 → 213
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1774 → 1794
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1772 → 1794
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:206 → 230
    zf-H2C2_2; Zinc-finger double domain

  3. XM_040651959.2 → XP_040507893.1  transcription factor HIVEP3 isoform X1

    UniProtKB/TrEMBL
    R4GH84
    Conserved Domains (6) summary
    smart00451
    Location:1797 → 1831
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1974 → 2378
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:193 → 213
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1774 → 1794
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1772 → 1794
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:206 → 230
    zf-H2C2_2; Zinc-finger double domain

  4. XM_425767.8 → XP_425767.4  transcription factor HIVEP3 isoform X1

    See identical proteins and their annotated locations for XP_425767.4

    UniProtKB/TrEMBL
    R4GH84
    Conserved Domains (6) summary
    smart00451
    Location:1797 → 1831
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1974 → 2378
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:193 → 213
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1774 → 1794
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1772 → 1794
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:206 → 230
    zf-H2C2_2; Zinc-finger double domain

  5. XM_004947683.5 → XP_004947740.1  transcription factor HIVEP3 isoform X1

    See identical proteins and their annotated locations for XP_004947740.1

    UniProtKB/TrEMBL
    R4GH84
    Conserved Domains (6) summary
    smart00451
    Location:1797 → 1831
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1974 → 2378
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:193 → 213
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1774 → 1794
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1772 → 1794
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:206 → 230
    zf-H2C2_2; Zinc-finger double domain

  6. XM_004947681.5 → XP_004947738.1  transcription factor HIVEP3 isoform X1

    See identical proteins and their annotated locations for XP_004947738.1

    UniProtKB/TrEMBL
    R4GH84
    Conserved Domains (6) summary
    smart00451
    Location:1797 → 1831
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1974 → 2378
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:193 → 213
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1774 → 1794
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1772 → 1794
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:206 → 230
    zf-H2C2_2; Zinc-finger double domain

  7. XM_046903647.1 → XP_046759603.1  transcription factor HIVEP3 isoform X1

    UniProtKB/TrEMBL
    R4GH84
    Related
    ENSGALP00010021051.1, ENSGALT00010036211.1

  8. XM_046903648.1 → XP_046759604.1  transcription factor HIVEP3 isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052595.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    845952..1063447
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040690070.2 → XP_040546004.1  transcription factor HIVEP3 isoform X1

    Conserved Domains (4) summary
    smart00451
    Location:1797 → 1831
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1974 → 2378
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:193 → 213
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1774 → 1794
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_040690074.2 → XP_040546008.1  transcription factor HIVEP3 isoform X1

    Conserved Domains (4) summary
    smart00451
    Location:1797 → 1831
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1974 → 2378
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:193 → 213
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1774 → 1794
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_040690076.2 → XP_040546010.1  transcription factor HIVEP3 isoform X1

    Conserved Domains (4) summary
    smart00451
    Location:1797 → 1831
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1974 → 2378
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:193 → 213
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1774 → 1794
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_040690075.2 → XP_040546009.1  transcription factor HIVEP3 isoform X1

    Conserved Domains (4) summary
    smart00451
    Location:1797 → 1831
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1974 → 2378
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:193 → 213
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1774 → 1794
    ZF_C2H2; C2H2 Zn finger [structural motif]

  5. XM_040690072.2 → XP_040546006.1  transcription factor HIVEP3 isoform X1

    Conserved Domains (4) summary
    smart00451
    Location:1797 → 1831
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1974 → 2378
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:193 → 213
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1774 → 1794
    ZF_C2H2; C2H2 Zn finger [structural motif]

  6. XM_040690073.2 → XP_040546007.1  transcription factor HIVEP3 isoform X1

    Conserved Domains (4) summary
    smart00451
    Location:1797 → 1831
    ZnF_U1; U1-like zinc finger
    PHA03247
    Location:1974 → 2378
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:193 → 213
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1774 → 1794
    ZF_C2H2; C2H2 Zn finger [structural motif]

  7. XM_046932198.1 → XP_046788154.1  transcription factor HIVEP3 isoform X1

  8. XM_046932199.1 → XP_046788155.1  transcription factor HIVEP3 isoform X2

Nucleotide Protein
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