U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CIR1 corepressor interacting with RBPJ, 1 [ Gallus gallus (chicken) ]

Gene ID: 426529, updated on 5-Mar-2024

Summary

Symbol
CIR1provided by CGNC
Full Name
corepressor interacting with RBPJ, 1provided by CGNC
Primary source
CGNC:52818
See related
Ensembl:ENSGALG00010022585
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CIR
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (16537368..16558301)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (16454829..16475765)

Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 155 Neighboring gene secernin 3 Neighboring gene uncharacterized LOC121111244 Neighboring gene Sp9 transcription factor Neighboring gene Obg like ATPase 1

Genomic regions, transcripts, and products

Pathways from PubChem

General protein information

Preferred Names
corepressor interacting with RBPJ 1
Names
CBF1 interacting corepressor

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031386.2NP_001026557.1  corepressor interacting with RBPJ 1

    See identical proteins and their annotated locations for NP_001026557.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000236
    UniProtKB/Swiss-Prot
    Q5ZI03
    UniProtKB/TrEMBL
    A0A8V0ZRN4
    Related
    ENSGALP00010033240.1, ENSGALT00010054975.1
    Conserved Domains (1) summary
    pfam10197
    Location:1349
    Cir_N; N-terminal domain of CBF1 interacting co-repressor CIR

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    16537368..16558301
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    16454829..16475765
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)