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PLD1 phospholipase D1 [ Gallus gallus (chicken) ]

Gene ID: 424986, updated on 3-Apr-2024

Summary

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Symbol
PLD1provided by CGNC
Full Name
phospholipase D1provided by CGNC
Primary source
CGNC:7028
See related
Ensembl:ENSGALG00010014093
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
PLD2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
29
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (19213511..19261239)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (19001167..19048811)

Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene tumor necrosis factor superfamily member 10 Neighboring gene growth hormone secretagogue receptor Neighboring gene fibronectin type III domain containing 3B Neighboring gene uncharacterized LOC107054123 Neighboring gene TRAF2 and NCK interacting kinase Neighboring gene solute carrier family 2 member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Congenital valvular defects associated with deleterious mutations in the PLD1 gene. Ta-Shma A, et al. J Med Genet, 2017 Apr. PMID 27799408

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microvillus assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase D1
Names
phospholipase D1, phosphatidylcholine-specific
phospholipase D2
XP_015147197.1
XP_015147200.1
XP_025009238.1
XP_040535484.1
XP_040535485.1
XP_040535486.1
XP_040535488.1
XP_040535489.1
XP_046754556.1
XP_046754557.1
XP_046754558.1
XP_046754559.1
XP_046780200.1
XP_046780201.1
XP_422793.5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    19213511..19261239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025153470.3 → XP_025009238.1  phospholipase D1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YMQ0
    Conserved Domains (1) summary
    PLN02866
    Location:84 → 1026
    PLN02866; phospholipase D

  2. XM_046898603.1 → XP_046754559.1  phospholipase D1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YUI0
    Related
    ENSGALP00010019910.1, ENSGALT00010033856.1

  3. XM_046898600.1 → XP_046754556.1  phospholipase D1 isoform X1

  4. XM_046898602.1 → XP_046754558.1  phospholipase D1 isoform X1

  5. XM_015291714.4 → XP_015147200.1  phospholipase D1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YMQ0, E1BVP2
    Related
    ENSGALP00010019918.1, ENSGALT00010033869.1
    Conserved Domains (1) summary
    PLN02866
    Location:80 → 1022
    PLN02866; phospholipase D

  6. XM_015291711.4 → XP_015147197.1  phospholipase D1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YMQ0
    Related
    ENSGALP00010019906.1, ENSGALT00010033843.1
    Conserved Domains (1) summary
    PLN02866
    Location:84 → 1026
    PLN02866; phospholipase D

  7. XM_422793.8 → XP_422793.5  phospholipase D1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YMQ0, A0A8V0YUI0
    Conserved Domains (1) summary
    PLN02866
    Location:78 → 1020
    PLN02866; phospholipase D

  8. XM_046898601.1 → XP_046754557.1  phospholipase D1 isoform X1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    19001167..19048811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040679554.2 → XP_040535488.1  phospholipase D1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YMQ0
    Conserved Domains (1) summary
    PLN02866
    Location:84 → 1026
    PLN02866; phospholipase D

  2. XM_040679555.2 → XP_040535489.1  phospholipase D1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YMQ0
    Conserved Domains (1) summary
    PLN02866
    Location:84 → 1026
    PLN02866; phospholipase D

  3. XM_040679550.2 → XP_040535484.1  phospholipase D1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YMQ0, E1BVP2
    Conserved Domains (1) summary
    PLN02866
    Location:80 → 1022
    PLN02866; phospholipase D

  4. XM_040679552.2 → XP_040535486.1  phospholipase D1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YMQ0
    Conserved Domains (1) summary
    PLN02866
    Location:84 → 1026
    PLN02866; phospholipase D

  5. XM_046924244.1 → XP_046780200.1  phospholipase D1 isoform X1

  6. XM_046924245.1 → XP_046780201.1  phospholipase D1 isoform X1

  7. XM_040679551.2 → XP_040535485.1  phospholipase D1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YMQ0, A0A8V0YUI0
    Conserved Domains (1) summary
    PLN02866
    Location:78 → 1020
    PLN02866; phospholipase D
Nucleotide Protein
Heading Accession and Version

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