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UBE2F ubiquitin conjugating enzyme E2 F (putative) [ Gallus gallus (chicken) ]

Gene ID: 424015, updated on 3-Apr-2024

Summary

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Symbol
UBE2Fprovided by CGNC
Full Name
ubiquitin conjugating enzyme E2 F (putative)provided by CGNC
Primary source
CGNC:2790
See related
Ensembl:ENSGALG00010012100
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
NCE2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (4649854..4717116)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (4576674..4658355)

Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene putative methyltransferase DDB_G0268948 Neighboring gene interferon lambda-3 Neighboring gene uncharacterized LOC121113383 Neighboring gene RNA binding motif protein 44 Neighboring gene LRR binding FLII interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular characterization of a potential receptor of Eimeria acervulina microneme protein 3 from chicken duodenal epithelial cells. Zhang Z, et al. Parasite, 2020. PMID 32195662, Free PMC Article
  2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NEDD8 transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein neddylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NEDD8-conjugating enzyme UBE2F
Names
NEDD8 carrier protein UBE2F
NEDD8 protein ligase UBE2F
NEDD8-conjugating enzyme 2
RING-type E3 NEDD8 transferase UBE2F
ubiquitin-conjugating enzyme E2 F
ubiquitin-conjugating enzyme E2F (putative)
NP_001006512.1
XP_040559317.1
XP_040559318.1
XP_040559319.1
XP_040559320.1
XP_046777202.1
XP_046777203.1
XP_046777204.1
XP_046777205.1
XP_046777206.1
XP_046777207.1
XP_046777208.1
XP_046799503.1
XP_046799504.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006512.2 → NP_001006512.1  NEDD8-conjugating enzyme UBE2F

    See identical proteins and their annotated locations for NP_001006512.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000235
    UniProtKB/Swiss-Prot
    Q5ZKX6
    UniProtKB/TrEMBL
    A0A8V0YCW0
    Related
    ENSGALP00010016779.1, ENSGALT00010029020.1
    Conserved Domains (1) summary
    COG5078
    Location:30 → 184
    COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4649854..4717116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046943547.1 → XP_046799503.1  NEDD8-conjugating enzyme UBE2F isoform X2

  2. XM_040703383.2 → XP_040559317.1  NEDD8-conjugating enzyme UBE2F isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y7W2, A0A8V0YGA7
    Related
    ENSGALP00010016767.1, ENSGALT00010029008.1
    Conserved Domains (1) summary
    cl00154
    Location:30 → 169
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

  3. XM_040703386.2 → XP_040559320.1  NEDD8-conjugating enzyme UBE2F isoform X5

    UniProtKB/TrEMBL
    A0A8V0YGA7, A0A8V0YGB6
    Related
    ENSGALP00010016775.1, ENSGALT00010029016.1
    Conserved Domains (1) summary
    cl00154
    Location:30 → 169
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

  4. XM_040703385.2 → XP_040559319.1  NEDD8-conjugating enzyme UBE2F isoform X4

    UniProtKB/TrEMBL
    A0A8V0YE49, A0A8V0YGA7
    Related
    ENSGALP00010016769.1, ENSGALT00010029010.1
    Conserved Domains (1) summary
    cl00154
    Location:30 → 169
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

  5. XM_046943548.1 → XP_046799504.1  NEDD8-conjugating enzyme UBE2F isoform X6

  6. XM_040703384.2 → XP_040559318.1  NEDD8-conjugating enzyme UBE2F isoform X3

    Conserved Domains (1) summary
    cl00154
    Location:22 → 151
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4576674..4658355
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046921247.1 → XP_046777203.1  NEDD8-conjugating enzyme UBE2F isoform X2

  2. XM_046921249.1 → XP_046777205.1  NEDD8-conjugating enzyme UBE2F isoform X7

    UniProtKB/Swiss-Prot
    Q5ZKX6

  3. XM_046921246.1 → XP_046777202.1  NEDD8-conjugating enzyme UBE2F isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y7W2

  4. XM_046921251.1 → XP_046777207.1  NEDD8-conjugating enzyme UBE2F isoform X5

    UniProtKB/TrEMBL
    A0A8V0YGB6

  5. XM_046921250.1 → XP_046777206.1  NEDD8-conjugating enzyme UBE2F isoform X4

    UniProtKB/TrEMBL
    A0A8V0YE49

  6. XM_046921252.1 → XP_046777208.1  NEDD8-conjugating enzyme UBE2F isoform X6

  7. XM_046921248.1 → XP_046777204.1  NEDD8-conjugating enzyme UBE2F isoform X3

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZKX6.1 GenPept UniProtKB/Swiss-Prot:Q5ZKX6

Gene LinkOut

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