U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC423110 USP6 N-terminal like [ Gallus gallus (chicken) ]

Gene ID: 423110, updated on 19-May-2023

Summary

Go to the top of the page Help
Symbol
LOC423110provided by CGNC
Full Name
USP6 N-terminal likeprovided by CGNC
Primary source
CGNC:5064
See related
Ensembl:ENSGALG00010025600
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
23
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (15642489..15708765, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (15616808..15683101, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 56 Neighboring gene HRas proto-oncogene, GTPase Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene ribonuclease/angiogenin inhibitor 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
USP6 N-terminal-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    15642489..15708765 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015286812.4 → XP_015142298.3  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Related
    ENSGALP00010038631.1, ENSGALT00010062471.1
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  2. XM_015286811.4 → XP_015142297.3  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  3. XM_046942301.1 → XP_046798257.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  4. XM_040701704.2 → XP_040557638.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  5. XM_046942303.1 → XP_046798259.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  6. XM_046942305.1 → XP_046798261.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  7. XM_046942304.1 → XP_046798260.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  8. XM_046942308.1 → XP_046798264.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  9. XM_046942306.1 → XP_046798262.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  10. XM_046942311.1 → XP_046798267.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  11. XM_046942310.1 → XP_046798266.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  12. XM_046942309.1 → XP_046798265.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  13. XM_040701707.2 → XP_040557641.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  14. XM_040701700.2 → XP_040557634.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  15. XM_040701701.2 → XP_040557635.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  16. XM_015286818.4 → XP_015142304.3  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  17. XM_015286817.4 → XP_015142303.3  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  18. XM_040701705.2 → XP_040557639.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  19. XM_046942316.1 → XP_046798272.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  20. XM_046942317.1 → XP_046798273.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  21. XM_046942312.1 → XP_046798268.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  22. XM_046942319.1 → XP_046798275.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  23. XM_046942313.1 → XP_046798269.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  24. XM_046942314.1 → XP_046798270.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  25. XM_040701699.2 → XP_040557633.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  26. XM_040701708.2 → XP_040557642.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  27. XM_046942318.1 → XP_046798274.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  28. XM_046942321.1 → XP_046798277.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  29. XM_046942320.1 → XP_046798276.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  30. XM_040701709.1 → XP_040557643.1  USP6 N-terminal-like protein isoform X2

    Conserved Domains (2) summary
    PHA03307
    Location:228 → 427
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam00566
    Location:8 → 166
    RabGAP-TBC; Rab-GTPase-TBC domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    15616808..15683101 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040673127.2 → XP_040529061.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  2. XM_040673117.2 → XP_040529051.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  3. XM_046919179.1 → XP_046775135.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  4. XM_046919182.1 → XP_046775138.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  5. XM_046919180.1 → XP_046775136.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  6. XM_046919181.1 → XP_046775137.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  7. XM_040673128.2 → XP_040529062.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  8. XM_040673119.2 → XP_040529053.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  9. XM_040673120.2 → XP_040529054.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  10. XM_040673129.2 → XP_040529063.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  11. XM_040673125.2 → XP_040529059.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  12. XM_040673122.2 → XP_040529056.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  13. XM_046919184.1 → XP_046775140.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  14. XM_040673126.2 → XP_040529060.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  15. XM_040673130.2 → XP_040529064.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2
    Conserved Domains (2) summary
    smart00164
    Location:96 → 302
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:356 → 555
    PHA03307; transcriptional regulator ICP4; Provisional

  16. XM_046919183.1 → XP_046775139.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  17. XM_046919186.1 → XP_046775142.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  18. XM_046919185.1 → XP_046775141.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8V1A3N2

  19. XM_040673131.1 → XP_040529065.1  USP6 N-terminal-like protein isoform X2

    Conserved Domains (2) summary
    PHA03307
    Location:228 → 427
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam00566
    Location:8 → 166
    RabGAP-TBC; Rab-GTPase-TBC domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials