POLR1A RNA polymerase I subunit A [Gallus gallus (chicken)] - Gene

Summary

Symbol: POLR1Aprovided by CGNC
Full Name: RNA polymerase I subunit Aprovided by CGNC
Primary source: CGNC:11758
See related: Ensembl:ENSGALG00010017763
Gene type: protein coding
RefSeq status: MODEL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 4

Exon count:: 34

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	4	NC_052535.1 (84945201..84975695, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	4	NC_052576.1 (84922908..84953440, complement)

Chromosome 4 - NC_052535.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables DNA-directed 5'-3' RNA polymerase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in DNA-templated transcription	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of RNA polymerase I complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: DNA-directed RNA polymerase I subunit RPA1

Names: polymerase (RNA) I polypeptide A, 194kDa; polymerase (RNA) I subunit A

XP_015141475.3

EC 2.7.7.6

XP_040527643.1

EC 2.7.7.6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

84945201..84975695 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015285989.4 → XP_015141475.3 DNA-directed RNA polymerase I subunit RPA1

UniProtKB/TrEMBL

A0A8V0Z2W8, A0A8V0ZAD3

Related

ENSGALP00010025422.1, ENSGALT00010042932.1

Conserved Domains (3) summary

cd02735
Location:1198 → 1706

RNAP_I_Rpa1_C; Largest subunit (Rpa1) of Eukaryotic RNA polymerase I (RNAP I), C-terminal domain

cd01435
Location:16 → 1003

RNAP_I_RPA1_N; Largest subunit (RPA1) of eukaryotic RNA polymerase I (RNAP I), N-terminal domain

TIGR02388
Location:1142 → 1234

rpoC2_cyan; DNA-directed RNA polymerase, beta'' subunit

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

84922908..84953440 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040671709.2 → XP_040527643.1 DNA-directed RNA polymerase I subunit RPA1

UniProtKB/TrEMBL

A0A8V0Z2W8

Conserved Domains (3) summary

cd02735
Location:1198 → 1706

RNAP_I_Rpa1_C; Largest subunit (Rpa1) of Eukaryotic RNA polymerase I (RNAP I), C-terminal domain

cd01435
Location:16 → 1003

RNAP_I_RPA1_N; Largest subunit (RPA1) of eukaryotic RNA polymerase I (RNAP I), N-terminal domain

TIGR02388
Location:1142 → 1234

rpoC2_cyan; DNA-directed RNA polymerase, beta'' subunit