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CTBP1 C-terminal binding protein 1 [ Gallus gallus (chicken) ]

Gene ID: 422904, updated on 9-Mar-2024

Summary

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Official Symbol
CTBP1provided by CGNC
Official Full Name
C-terminal binding protein 1provided by CGNC
Primary source
CGNC:11723
See related
Ensembl:ENSGALG00010017665
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See CTBP1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
18
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (84050913..84272697)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (84029613..84251333)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121113230 Neighboring gene macrophage erythroblast attacher Neighboring gene spondin 2 Neighboring gene uncharacterized LOC121110769 Neighboring gene transmembrane emp24 protein transport domain containing 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interaction of MEQ protein and C-terminal-binding protein is critical for induction of lymphomas by Marek's disease virus. Brown AC, et al. Proc Natl Acad Sci U S A, 2006 Feb 7. PMID 16446447, Free PMC Article
  2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1
NP_001012908.1
NP_001383955.1
NP_001383956.1
NP_001383957.1
NP_001383958.1
NP_001383959.1
NP_001383960.1
XP_046772347.1
XP_046772348.1
XP_046772349.1
XP_046772350.1
XP_046772351.1
XP_046772352.1
XP_046772353.1
XP_046772354.1
XP_046772355.1
XP_046772356.1
XP_046772357.1
XP_046772358.1
XP_046772359.1
XP_046772360.1
XP_046772361.1
XP_046772362.1
XP_046772363.1
XP_046772364.1
XP_046772365.1
XP_046772366.1
XP_046772367.1
XP_046772368.1
XP_046772369.1
XP_046772370.1
XP_046772371.1
XP_046772372.1
XP_046772373.1
XP_046772374.1
XP_046772375.1
XP_046772376.1
XP_046796186.1
XP_046796187.1
XP_046796188.1
XP_046796189.1
XP_046796190.1
XP_046796191.1
XP_046796192.1
XP_046796193.1
XP_046796194.1
XP_046796195.1
XP_046796196.1
XP_046796197.1
XP_046796198.1
XP_046796199.1
XP_046796200.1
XP_046796201.1
XP_046796202.1
XP_046796203.1
XP_046796204.1
XP_046796206.1
XP_046796207.1
XP_046796208.1
XP_046796209.1
XP_046796210.1
XP_046796211.1
XP_046796212.1
XP_046796213.1
XP_046796214.1
XP_046796215.1
XP_046796217.1
XP_046796218.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001012890.2 → NP_001012908.1  C-terminal-binding protein 1 isoform 3

    See identical proteins and their annotated locations for NP_001012908.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000074
    UniProtKB/TrEMBL
    Q5ZIZ6
    Related
    ENSGALP00010025208.1, ENSGALT00010042718.1
    Conserved Domains (2) summary
    COG0111
    Location:44 → 343
    SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. NM_001397026.1 → NP_001383955.1  C-terminal-binding protein 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000074
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. NM_001397027.1 → NP_001383956.1  C-terminal-binding protein 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000074
    UniProtKB/TrEMBL
    A0A8V0Z3Y2
    Related
    ENSGALP00010025203.1, ENSGALT00010042713.1
    Conserved Domains (1) summary
    cd05299
    Location:28 → 344
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. NM_001397028.1 → NP_001383957.1  C-terminal-binding protein 1 isoform 4

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000074
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  5. NM_001397029.1 → NP_001383958.1  C-terminal-binding protein 1 isoform 5

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000074
    Conserved Domains (1) summary
    cd05299
    Location:9 → 327
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  6. NM_001397030.1 → NP_001383959.1  C-terminal-binding protein 1 isoform 6

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000074
    Conserved Domains (1) summary
    cd05299
    Location:28 → 277
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  7. NM_001397031.1 → NP_001383960.1  C-terminal-binding protein 1 isoform 7

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000074
    Conserved Domains (1) summary
    cd05299
    Location:3 → 233
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    84050913..84272697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046940238.1 → XP_046796194.1  C-terminal-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A1D5P770

  2. XM_046940240.1 → XP_046796196.1  C-terminal-binding protein 1 isoform X5

  3. XM_046940234.1 → XP_046796190.1  C-terminal-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A1D5P770

  4. XM_046940235.1 → XP_046796191.1  C-terminal-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A1D5P770

  5. XM_046940236.1 → XP_046796192.1  C-terminal-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A1D5P770

  6. XM_046940254.1 → XP_046796210.1  C-terminal-binding protein 1 isoform X14

  7. XM_046940257.1 → XP_046796213.1  C-terminal-binding protein 1 isoform X15

    UniProtKB/TrEMBL
    A0A8V0Z2A2

  8. XM_046940245.1 → XP_046796201.1  C-terminal-binding protein 1 isoform X10

    UniProtKB/TrEMBL
    Q5ZIZ6

  9. XM_046940246.1 → XP_046796202.1  C-terminal-binding protein 1 isoform X11

  10. XM_046940247.1 → XP_046796203.1  C-terminal-binding protein 1 isoform X12

  11. XM_046940248.1 → XP_046796204.1  C-terminal-binding protein 1 isoform X13

  12. XM_046940252.1 → XP_046796208.1  C-terminal-binding protein 1 isoform X14

  13. XM_046940233.1 → XP_046796189.1  C-terminal-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A1D5P770
    Related
    ENSGALP00010025211.1, ENSGALT00010042721.1

  14. XM_046940239.1 → XP_046796195.1  C-terminal-binding protein 1 isoform X5

  15. XM_046940241.1 → XP_046796197.1  C-terminal-binding protein 1 isoform X6

  16. XM_046940242.1 → XP_046796198.1  C-terminal-binding protein 1 isoform X7

  17. XM_046940261.1 → XP_046796217.1  C-terminal-binding protein 1 isoform X18

  18. XM_046940253.1 → XP_046796209.1  C-terminal-binding protein 1 isoform X14

  19. XM_046940237.1 → XP_046796193.1  C-terminal-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A1D5P770

  20. XM_046940250.1 → XP_046796206.1  C-terminal-binding protein 1 isoform X14

  21. XM_046940256.1 → XP_046796212.1  C-terminal-binding protein 1 isoform X15

    UniProtKB/TrEMBL
    A0A8V0Z2A2
    Related
    ENSGALP00010025207.1, ENSGALT00010042717.1

  22. XM_046940258.1 → XP_046796214.1  C-terminal-binding protein 1 isoform X16

  23. XM_046940259.1 → XP_046796215.1  C-terminal-binding protein 1 isoform X17

  24. XM_046940230.1 → XP_046796186.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YVU5
    Related
    ENSGALP00010025200.1, ENSGALT00010042710.1

  25. XM_046940243.1 → XP_046796199.1  C-terminal-binding protein 1 isoform X8

  26. XM_046940244.1 → XP_046796200.1  C-terminal-binding protein 1 isoform X9

  27. XM_046940262.1 → XP_046796218.1  C-terminal-binding protein 1 isoform X19

  28. XM_046940251.1 → XP_046796207.1  C-terminal-binding protein 1 isoform X14

  29. XM_046940231.1 → XP_046796187.1  C-terminal-binding protein 1 isoform X2

  30. XM_046940232.1 → XP_046796188.1  C-terminal-binding protein 1 isoform X3

  31. XM_046940255.1 → XP_046796211.1  C-terminal-binding protein 1 isoform X14

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    84029613..84251333
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046916395.1 → XP_046772351.1  C-terminal-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A1D5P770

  2. XM_046916398.1 → XP_046772354.1  C-terminal-binding protein 1 isoform X5

  3. XM_046916413.1 → XP_046772369.1  C-terminal-binding protein 1 isoform X14

  4. XM_046916416.1 → XP_046772372.1  C-terminal-binding protein 1 isoform X15

    UniProtKB/TrEMBL
    A0A8V0Z2A2

  5. XM_046916405.1 → XP_046772361.1  C-terminal-binding protein 1 isoform X10

    UniProtKB/TrEMBL
    Q5ZIZ6

  6. XM_046916406.1 → XP_046772362.1  C-terminal-binding protein 1 isoform X11

  7. XM_046916407.1 → XP_046772363.1  C-terminal-binding protein 1 isoform X12

  8. XM_046916408.1 → XP_046772364.1  C-terminal-binding protein 1 isoform X13

  9. XM_046916411.1 → XP_046772367.1  C-terminal-binding protein 1 isoform X14

  10. XM_046916394.1 → XP_046772350.1  C-terminal-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A1D5P770

  11. XM_046916397.1 → XP_046772353.1  C-terminal-binding protein 1 isoform X5

  12. XM_046916400.1 → XP_046772356.1  C-terminal-binding protein 1 isoform X6

  13. XM_046916402.1 → XP_046772358.1  C-terminal-binding protein 1 isoform X7

  14. XM_046916419.1 → XP_046772375.1  C-terminal-binding protein 1 isoform X18

  15. XM_046916412.1 → XP_046772368.1  C-terminal-binding protein 1 isoform X14

  16. XM_046916396.1 → XP_046772352.1  C-terminal-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A1D5P770

  17. XM_046916399.1 → XP_046772355.1  C-terminal-binding protein 1 isoform X20

  18. XM_046916401.1 → XP_046772357.1  C-terminal-binding protein 1 isoform X21

  19. XM_046916409.1 → XP_046772365.1  C-terminal-binding protein 1 isoform X14

  20. XM_046916415.1 → XP_046772371.1  C-terminal-binding protein 1 isoform X15

    UniProtKB/TrEMBL
    A0A8V0Z2A2

  21. XM_046916417.1 → XP_046772373.1  C-terminal-binding protein 1 isoform X16

  22. XM_046916418.1 → XP_046772374.1  C-terminal-binding protein 1 isoform X17

  23. XM_046916391.1 → XP_046772347.1  C-terminal-binding protein 1 isoform X1

  24. XM_046916403.1 → XP_046772359.1  C-terminal-binding protein 1 isoform X8

  25. XM_046916404.1 → XP_046772360.1  C-terminal-binding protein 1 isoform X9

  26. XM_046916420.1 → XP_046772376.1  C-terminal-binding protein 1 isoform X19

  27. XM_046916410.1 → XP_046772366.1  C-terminal-binding protein 1 isoform X14

  28. XM_046916392.1 → XP_046772348.1  C-terminal-binding protein 1 isoform X2

  29. XM_046916393.1 → XP_046772349.1  C-terminal-binding protein 1 isoform X3

  30. XM_046916414.1 → XP_046772370.1  C-terminal-binding protein 1 isoform X14

Nucleotide Protein Strain
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