U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HTT huntingtin [ Gallus gallus (chicken) ]

Gene ID: 422878, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Symbol
HTTprovided by CGNC
Full Name
huntingtinprovided by CGNC
Primary source
CGNC:11658
See related
Ensembl:ENSGALG00010016385
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
HD
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
67
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (81638780..81716852, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (81616834..81694899, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene regulator of G-protein signaling 12 Neighboring gene Myb/SANT DNA binding domain containing 1 Neighboring gene G protein-coupled receptor kinase 4 Neighboring gene NOP14 nucleolar protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
huntingtin; LOW QUALITY PROTEIN: huntingtin
Names
huntingtin (Huntington disease)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    81638780..81716852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_420822.8 → XP_420822.3  LOW QUALITY PROTEIN: huntingtin isoform X1

    UniProtKB/TrEMBL
    A0A8V0YVY1
    Related
    ENSGALP00010022779.1, ENSGALT00010039477.1
    Conserved Domains (2) summary
    pfam12372
    Location:1479 → 1505
    DUF3652; Huntingtin protein region
    sd00044
    Location:77 → 99
    HEAT; HEAT repeat [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    81616834..81694899 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040670153.2 → XP_040526087.1  huntingtin isoform X3

    UniProtKB/TrEMBL
    A0A8V0YVK5
    Conserved Domains (1) summary
    sd00044
    Location:77 → 99
    HEAT; HEAT repeat [structural motif]

  2. XM_040670154.2 → XP_040526088.1  huntingtin isoform X1

    UniProtKB/TrEMBL
    A0A8V0YVY1
    Conserved Domains (1) summary
    sd00044
    Location:77 → 99
    HEAT; HEAT repeat [structural motif]

  3. XM_040670152.2 → XP_040526086.1  huntingtin isoform X2

    UniProtKB/TrEMBL
    A0A8V0YVY1
    Conserved Domains (1) summary
    sd00044
    Location:77 → 99
    HEAT; HEAT repeat [structural motif]

  4. XM_040670155.2 → XP_040526089.1  huntingtin isoform X4

    UniProtKB/TrEMBL
    A0A8V0YVJ5
    Conserved Domains (1) summary
    sd00044
    Location:77 → 99
    HEAT; HEAT repeat [structural motif]

RNA

  1. XR_005849287.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous