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ACSL1 acyl-CoA synthetase long-chain family member 1 [ Gallus gallus (chicken) ]

Gene ID: 422547, updated on 3-Apr-2024

Summary

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Symbol
ACSL1provided by CGNC
Full Name
acyl-CoA synthetase long-chain family member 1provided by CGNC
Primary source
CGNC:8071
See related
Ensembl:ENSGALG00010007007
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
25
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (38972617..39044796)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (38955445..38992424)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107051755 Neighboring gene solute carrier family 25 member 4 Neighboring gene uncharacterized LOC121110733 Neighboring gene helt bHLH transcription factor Neighboring gene centromere protein U Neighboring gene primase and DNA directed polymerase Neighboring gene caspase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 1
NP_001012596.1
XP_015131713.1
XP_025005396.1
XP_040554865.1
XP_046771990.1
XP_046771991.1
XP_046771992.1
XP_046771993.1
XP_046771994.1
XP_046796046.1
XP_046796047.1
XP_046796048.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001012578.2 → NP_001012596.1  long-chain-fatty-acid--CoA ligase 1

    See identical proteins and their annotated locations for NP_001012596.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1L1RS69, A0A8V0XMJ6, A0A8V0XWM7, Q5F420
    Related
    ENSGALP00010009421.1, ENSGALT00010016682.1
    Conserved Domains (1) summary
    cd05927
    Location:117 → 695
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    38972617..39044796
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040698931.2 → XP_040554865.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1L1RS69, A0A8V0XMJ6, A0A8V0XWM7, Q5F420
    Conserved Domains (1) summary
    cd05927
    Location:117 → 695
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  2. XM_046940091.1 → XP_046796047.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1L1RS69, Q5F420

  3. XM_046940090.1 → XP_046796046.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1L1RS69, Q5F420

  4. XM_025149628.3 → XP_025005396.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1L1RS69, A0A8V0XMJ6, A0A8V0XWM7, Q5F420
    Related
    ENSGALP00010009412.1, ENSGALT00010016653.1
    Conserved Domains (1) summary
    cd05927
    Location:117 → 695
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  5. XM_015276227.4 → XP_015131713.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1L1RS69, A0A8V0XMJ6, A0A8V0XWM7, Q5F420
    Related
    ENSGALP00010009419.1, ENSGALT00010016673.1
    Conserved Domains (1) summary
    cd05927
    Location:117 → 695
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  6. XM_046940092.1 → XP_046796048.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1L1RS69, Q5F420

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    38955445..38992424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046916038.1 → XP_046771994.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1L1RS69, Q5F420

  2. XM_046916037.1 → XP_046771993.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1L1RS69, Q5F420

  3. XM_046916036.1 → XP_046771992.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1L1RS69, Q5F420

  4. XM_046916035.1 → XP_046771991.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1L1RS69, Q5F420

  5. XM_046916034.1 → XP_046771990.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1L1RS69, Q5F420
Nucleotide Protein Strain
Heading Accession and Version

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