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TAF7 TATA-box binding protein associated factor 7 [ Gallus gallus (chicken) ]

Gene ID: 422192, updated on 5-Mar-2024

Summary

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Symbol
TAF7provided by CGNC
Full Name
TATA-box binding protein associated factor 7provided by CGNC
Primary source
CGNC:51651
See related
Ensembl:ENSGALG00010016008
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
TAF7L
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (2000723..2007587)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (2037519..2044096)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L36a Neighboring gene Bruton tyrosine kinase Neighboring gene translocase of inner mitochondrial membrane 8A Neighboring gene magnesium transporter NIPA2-like Neighboring gene uncharacterized LOC121110550 Neighboring gene aryl hydrocarbon receptor interacting protein like 1 Neighboring gene dystrophin related protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA polymerase II preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription initiation factor TFIID subunit 7-like
Names
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
TATA-box binding protein associated factor 7 like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001277886.2 → NP_001264815.1  transcription initiation factor TFIID subunit 7-like

    See identical proteins and their annotated locations for NP_001264815.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000071
    UniProtKB/TrEMBL
    A0A1L1S0Q0, F1NI87
    Conserved Domains (1) summary
    pfam04658
    Location:12 → 177
    TAFII55_N; TAFII55 protein conserved region

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    2000723..2007587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015278223.4 → XP_015133709.1  transcription initiation factor TFIID subunit 7-like isoform X2

    UniProtKB/TrEMBL
    A0A1L1S0Q0, F1NI87
    Related
    ENSGALP00010022305.1, ENSGALT00010038554.1
    Conserved Domains (1) summary
    pfam04658
    Location:12 → 177
    TAFII55_N; TAFII55 protein conserved region

  2. XM_015278224.4 → XP_015133710.1  transcription initiation factor TFIID subunit 7-like isoform X1

    Conserved Domains (1) summary
    pfam04658
    Location:12 → 177
    TAFII55_N; TAFII55 protein conserved region

  3. XM_040698782.2 → XP_040554716.1  transcription initiation factor TFIID subunit 7-like isoform X2

    UniProtKB/TrEMBL
    A0A1L1S0Q0, F1NI87
    Conserved Domains (1) summary
    pfam04658
    Location:12 → 177
    TAFII55_N; TAFII55 protein conserved region

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    2037519..2044096
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046915705.1 → XP_046771661.1  transcription initiation factor TFIID subunit 7-like isoform X2

    UniProtKB/TrEMBL
    A0A1L1S0Q0, F1NI87

  2. XM_046915703.1 → XP_046771659.1  transcription initiation factor TFIID subunit 7-like isoform X1

  3. XM_046915704.1 → XP_046771660.1  transcription initiation factor TFIID subunit 7-like isoform X2

    UniProtKB/TrEMBL
    A0A1L1S0Q0, F1NI87
Nucleotide Protein Strain
Heading Accession and Version

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