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KLF11 Kruppel like factor 11 [ Gallus gallus (chicken) ]

Gene ID: 421934, updated on 3-Apr-2024

Summary

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Symbol
KLF11provided by CGNC
Full Name
Kruppel like factor 11provided by CGNC
Primary source
CGNC:51568
See related
Ensembl:ENSGALG00010002444
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (96177645..96185317)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (95993566..96001254)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112532061 Neighboring gene TATA-box binding protein associated factor, RNA polymerase I subunit B Neighboring gene grainyhead like transcription factor 1 Neighboring gene uncharacterized LOC107051686 Neighboring gene uncharacterized LOC421935 Neighboring gene microRNA mir-12265

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 11

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006417.2 → NP_001006417.2  Krueppel-like factor 11

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000066
    UniProtKB/TrEMBL
    A0A8V0X5X4, Q5ZJT5
    Related
    ENSGALP00010003471.1, ENSGALT00010005632.1
    Conserved Domains (3) summary
    COG5048
    Location:402 → 459
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:409 → 428
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam05109
    Location:223 → 399
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    96177645..96185317
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015276039.4 → XP_015131525.2  Krueppel-like factor 11 isoform X2

    UniProtKB/TrEMBL
    Q5ZJT5
    Conserved Domains (3) summary
    PHA03247
    Location:110 → 346
    PHA03247; large tegument protein UL36; Provisional
    COG5048
    Location:347 → 404
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:354 → 373
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_015276040.4 → XP_015131526.2  Krueppel-like factor 11 isoform X1

    UniProtKB/TrEMBL
    Q5ZJT5
    Conserved Domains (3) summary
    COG5048
    Location:300 → 357
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:307 → 326
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam05109
    Location:121 → 297
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    95993566..96001254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046914164.1 → XP_046770120.1  Krueppel-like factor 11 isoform X1

Nucleotide Protein Strain
Heading Accession and Version

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