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RAB23 RAB23, member RAS oncogene family [ Gallus gallus (chicken) ]

Gene ID: 421879, updated on 3-Apr-2024

Summary

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Symbol
RAB23provided by CGNC
Full Name
RAB23, member RAS oncogene familyprovided by CGNC
Primary source
CGNC:12171
See related
Ensembl:ENSGALG00010002340
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (86425022..86439525)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (86231129..86245645)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene primase (DNA) subunit 2 Neighboring gene uncharacterized LOC121110330 Neighboring gene BAG cochaperone 2 Neighboring gene zinc finger protein 451

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rab23 GTPase is expressed asymmetrically in Hensen's node and plays a role in the dorsoventral patterning of the chick neural tube. Li N, et al. Dev Dyn, 2007 Nov. PMID 17937392
  2. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Rab23 plays an important role in patterning the dorso-ventral axis by dorsalizing the neural tube
    Title: Rab23 GTPase is expressed asymmetrically in Hensen's node and plays a role in the dorsoventral patterning of the chick neural tube.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-23
NP_001385026.1
XP_015140314.2
XP_040553119.1
XP_046770092.1
XP_046770093.1
XP_046770094.1
XP_046794875.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001398097.1 → NP_001385026.1  ras-related protein Rab-23

    Status: VALIDATED

    Source sequence(s)
    BU264069, BU425173, BX929572, CK986525, JAENSK010000065
    UniProtKB/TrEMBL
    A0A8V0XC33
    Related
    ENSGALP00010003131.1, ENSGALT00010005292.1
    Conserved Domains (1) summary
    cd04106
    Location:22 → 169
    Rab23_like; Rab GTPase family 23 (Rab23)-like

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    86425022..86439525
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015284828.4 → XP_015140314.2  ras-related protein Rab-23 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XC33, A8VIF4
    Conserved Domains (1) summary
    cd04106
    Location:22 → 169
    Rab23_like; Rab GTPase family 23 (Rab23)-like

  2. XM_040697185.2 → XP_040553119.1  ras-related protein Rab-23 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XC33, A8VIF4
    Related
    ENSGALP00010003130.1, ENSGALT00010005291.1
    Conserved Domains (1) summary
    cd04106
    Location:22 → 169
    Rab23_like; Rab GTPase family 23 (Rab23)-like

  3. XM_046938919.1 → XP_046794875.1  ras-related protein Rab-23 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XC33

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    86231129..86245645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046914137.1 → XP_046770093.1  ras-related protein Rab-23 isoform X1

  2. XM_046914138.1 → XP_046770094.1  ras-related protein Rab-23 isoform X1

  3. XM_046914136.1 → XP_046770092.1  ras-related protein Rab-23 isoform X1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001110060.1: Suppressed sequence

    Description
    NM_001110060.1: This RefSeq was removed because currently there is insufficient support for the transcript.
Nucleotide Protein Strain
Heading Accession and Version

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