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REPS1 RALBP1 associated Eps domain containing 1 [ Gallus gallus (chicken) ]

Gene ID: 421678, updated on 3-Apr-2024

Summary

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Symbol
REPS1provided by CGNC
Full Name
RALBP1 associated Eps domain containing 1provided by CGNC
Primary source
CGNC:10351
See related
Ensembl:ENSGALG00010004214
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
22
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (53796647..53862451)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (53703256..53769035)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053000 Neighboring gene ABRA C-terminal like Neighboring gene microRNA 7462 Neighboring gene coiled-coil domain containing 28A Neighboring gene NHS like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. Carre W, et al. Physiol Genomics, 2006 May 16. PMID 16554550
  2. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
  3. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ralBP1-associated Eps domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001395988.1 → NP_001382917.1  ralBP1-associated Eps domain-containing protein 1

    Status: VALIDATED

    Source sequence(s)
    AJ720242, AJ735976, BQ038339, BU204894, BU268349, BU355599, CB016647, CR385922, CR390708, HAEK01005558, HAEK01174328, HAEK01193728, JAENSK010000063
    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (2) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    53796647..53862451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015284082.4 → XP_015139568.1  ralBP1-associated Eps domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (3) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cd00052
    Location:290 → 356
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  2. XM_015284091.4 → XP_015139577.1  ralBP1-associated Eps domain-containing protein 1 isoform X15

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (3) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cd00052
    Location:290 → 356
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  3. XM_015284085.4 → XP_015139571.1  ralBP1-associated Eps domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (3) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cd00052
    Location:290 → 356
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  4. XM_025148733.3 → XP_025004501.1  ralBP1-associated Eps domain-containing protein 1 isoform X17

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (2) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

  5. XM_015284083.4 → XP_015139569.1  ralBP1-associated Eps domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (3) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cd00052
    Location:290 → 356
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  6. XM_015284090.4 → XP_015139576.1  ralBP1-associated Eps domain-containing protein 1 isoform X12

    UniProtKB/TrEMBL
    A0A8V0XJ00, Q5ZK42
    Related
    ENSGALP00010005743.1, ENSGALT00010009842.1
    Conserved Domains (3) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cd00052
    Location:290 → 356
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  7. XM_040697119.2 → XP_040553053.1  ralBP1-associated Eps domain-containing protein 1 isoform X25

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (2) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

  8. XM_046938844.1 → XP_046794800.1  ralBP1-associated Eps domain-containing protein 1 isoform X14

  9. XM_046938850.1 → XP_046794806.1  ralBP1-associated Eps domain-containing protein 1 isoform X26

  10. XM_015284086.4 → XP_015139572.1  ralBP1-associated Eps domain-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (3) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cd00052
    Location:290 → 356
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  11. XM_040697117.2 → XP_040553051.1  ralBP1-associated Eps domain-containing protein 1 isoform X20

    UniProtKB/TrEMBL
    A0A1D5NX04, Q5ZK42
    Related
    ENSGALP00010005742.1, ENSGALT00010009841.1
    Conserved Domains (2) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

  12. XM_015284087.4 → XP_015139573.1  ralBP1-associated Eps domain-containing protein 1 isoform X5

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (3) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cd00052
    Location:290 → 356
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  13. XM_040697118.2 → XP_040553052.1  ralBP1-associated Eps domain-containing protein 1 isoform X22

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (2) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

  14. XM_025148732.3 → XP_025004500.1  ralBP1-associated Eps domain-containing protein 1 isoform X7

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (2) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

  15. XM_046938845.1 → XP_046794801.1  ralBP1-associated Eps domain-containing protein 1 isoform X21

  16. XM_040697114.2 → XP_040553048.1  ralBP1-associated Eps domain-containing protein 1 isoform X8

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (2) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

  17. XM_015284092.4 → XP_015139578.1  ralBP1-associated Eps domain-containing protein 1 isoform X16

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (3) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cd00052
    Location:290 → 356
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  18. XM_015284093.4 → XP_015139579.1  ralBP1-associated Eps domain-containing protein 1 isoform X18

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (3) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cd00052
    Location:290 → 356
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  19. XM_040697121.2 → XP_040553055.1  ralBP1-associated Eps domain-containing protein 1 isoform X27

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (2) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

  20. XM_015284088.4 → XP_015139574.1  ralBP1-associated Eps domain-containing protein 1 isoform X6

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (3) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cd00052
    Location:290 → 356
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  21. XM_040697115.2 → XP_040553049.1  ralBP1-associated Eps domain-containing protein 1 isoform X9

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (2) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

  22. XM_025148734.3 → XP_025004502.1  ralBP1-associated Eps domain-containing protein 1 isoform X19

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (2) summary
    smart00027
    Location:279 → 370
    EH; Eps15 homology domain
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

  23. XM_046938851.1 → XP_046794807.1  ralBP1-associated Eps domain-containing protein 1 isoform X28

  24. XM_015284089.4 → XP_015139575.1  ralBP1-associated Eps domain-containing protein 1 isoform X10

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (3) summary
    smart00027
    Location:258 → 349
    EH; Eps15 homology domain
    cd00052
    Location:269 → 335
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl08302
    Location:14 → 81
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  25. XM_040697116.2 → XP_040553050.1  ralBP1-associated Eps domain-containing protein 1 isoform X11

    UniProtKB/TrEMBL
    Q5ZK42
    Conserved Domains (2) summary
    smart00027
    Location:258 → 349
    EH; Eps15 homology domain
    cl27812
    Location:6 → 85
    EF-hand_4; Cytoskeletal-regulatory complex EF hand

  26. XM_046938848.1 → XP_046794804.1  ralBP1-associated Eps domain-containing protein 1 isoform X24

  27. XM_046938852.1 → XP_046794808.1  ralBP1-associated Eps domain-containing protein 1 isoform X29

  28. XM_046938843.1 → XP_046794799.1  ralBP1-associated Eps domain-containing protein 1 isoform X13

  29. XM_046938847.1 → XP_046794803.1  ralBP1-associated Eps domain-containing protein 1 isoform X23

  30. XM_046938846.1 → XP_046794802.1  ralBP1-associated Eps domain-containing protein 1 isoform X23

RNA

  1. XR_001465852.4 RNA Sequence

  2. XR_003074221.3 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    53703256..53769035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046913938.1 → XP_046769894.1  ralBP1-associated Eps domain-containing protein 1 isoform X1

  2. XM_046913952.1 → XP_046769908.1  ralBP1-associated Eps domain-containing protein 1 isoform X15

  3. XM_046913939.1 → XP_046769895.1  ralBP1-associated Eps domain-containing protein 1 isoform X2

  4. XM_046913954.1 → XP_046769910.1  ralBP1-associated Eps domain-containing protein 1 isoform X17

  5. XM_046913940.1 → XP_046769896.1  ralBP1-associated Eps domain-containing protein 1 isoform X3

  6. XM_046913949.1 → XP_046769905.1  ralBP1-associated Eps domain-containing protein 1 isoform X12

    UniProtKB/TrEMBL
    A0A8V0XJ00

  7. XM_046913963.1 → XP_046769919.1  ralBP1-associated Eps domain-containing protein 1 isoform X25

  8. XM_046913951.1 → XP_046769907.1  ralBP1-associated Eps domain-containing protein 1 isoform X14

  9. XM_046913964.1 → XP_046769920.1  ralBP1-associated Eps domain-containing protein 1 isoform X26

  10. XM_046913941.1 → XP_046769897.1  ralBP1-associated Eps domain-containing protein 1 isoform X4

  11. XM_046913957.1 → XP_046769913.1  ralBP1-associated Eps domain-containing protein 1 isoform X20

    UniProtKB/TrEMBL
    A0A1D5NX04

  12. XM_046913942.1 → XP_046769898.1  ralBP1-associated Eps domain-containing protein 1 isoform X5

  13. XM_046913959.1 → XP_046769915.1  ralBP1-associated Eps domain-containing protein 1 isoform X22

  14. XM_046913944.1 → XP_046769900.1  ralBP1-associated Eps domain-containing protein 1 isoform X7

  15. XM_046913958.1 → XP_046769914.1  ralBP1-associated Eps domain-containing protein 1 isoform X21

  16. XM_046913945.1 → XP_046769901.1  ralBP1-associated Eps domain-containing protein 1 isoform X8

  17. XM_046913953.1 → XP_046769909.1  ralBP1-associated Eps domain-containing protein 1 isoform X16

  18. XM_046913955.1 → XP_046769911.1  ralBP1-associated Eps domain-containing protein 1 isoform X18

  19. XM_046913965.1 → XP_046769921.1  ralBP1-associated Eps domain-containing protein 1 isoform X27

  20. XM_046913943.1 → XP_046769899.1  ralBP1-associated Eps domain-containing protein 1 isoform X6

  21. XM_046913946.1 → XP_046769902.1  ralBP1-associated Eps domain-containing protein 1 isoform X9

  22. XM_046913956.1 → XP_046769912.1  ralBP1-associated Eps domain-containing protein 1 isoform X19

  23. XM_046913966.1 → XP_046769922.1  ralBP1-associated Eps domain-containing protein 1 isoform X28

  24. XM_046913947.1 → XP_046769903.1  ralBP1-associated Eps domain-containing protein 1 isoform X10

  25. XM_046913948.1 → XP_046769904.1  ralBP1-associated Eps domain-containing protein 1 isoform X11

  26. XM_046913962.1 → XP_046769918.1  ralBP1-associated Eps domain-containing protein 1 isoform X24

  27. XM_046913967.1 → XP_046769923.1  ralBP1-associated Eps domain-containing protein 1 isoform X29

  28. XM_046913950.1 → XP_046769906.1  ralBP1-associated Eps domain-containing protein 1 isoform X13

  29. XM_046913961.1 → XP_046769917.1  ralBP1-associated Eps domain-containing protein 1 isoform X23

  30. XM_046913960.1 → XP_046769916.1  ralBP1-associated Eps domain-containing protein 1 isoform X23

RNA

  1. XR_006933949.1 RNA Sequence

  2. XR_006933950.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001012877.1: Suppressed sequence

    Description
    NM_001012877.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein Strain
Heading Accession and Version

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