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RAB5A RAB5A, member RAS oncogene family [ Gallus gallus (chicken) ]

Gene ID: 420649, updated on 5-Mar-2024

Summary

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Symbol
RAB5Aprovided by CGNC
Full Name
RAB5A, member RAS oncogene familyprovided by CGNC
Primary source
CGNC:51310
See related
Ensembl:ENSGALG00010001760
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (35719463..35741116)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (35768886..35790565)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene PHD finger protein 7-like Neighboring gene PHD finger protein 7-like Neighboring gene EF-hand domain family member B Neighboring gene protein phosphatase 2C like domain containing 1 Neighboring gene lysine acetyltransferase 2B Neighboring gene shugoshin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-5A
NP_001006363.1
XP_015136976.1
XP_046767155.1
XP_046767156.1
XP_046767157.1
XP_046779124.1
XP_046779129.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006363.2 → NP_001006363.1  ras-related protein Rab-5A

    See identical proteins and their annotated locations for NP_001006363.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ720737
    UniProtKB/TrEMBL
    Q5ZIP7
    Related
    ENSGALP00010002320.1, ENSGALT00010004021.1
    Conserved Domains (1) summary
    cd01860
    Location:20 → 182
    Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    35719463..35741116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046923168.1 → XP_046779124.1  ras-related protein Rab-5A isoform X1

    UniProtKB/TrEMBL
    Q5ZIP7

  2. XM_015281490.4 → XP_015136976.1  ras-related protein Rab-5A isoform X1

    UniProtKB/TrEMBL
    Q5ZIP7
    Conserved Domains (1) summary
    cd01860
    Location:20 → 182
    Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion

  3. XM_046923173.1 → XP_046779129.1  ras-related protein Rab-5A isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    35768886..35790565
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046911200.1 → XP_046767156.1  ras-related protein Rab-5A isoform X1

    UniProtKB/TrEMBL
    Q5ZIP7

  2. XM_046911199.1 → XP_046767155.1  ras-related protein Rab-5A isoform X1

    UniProtKB/TrEMBL
    Q5ZIP7

  3. XM_046911201.1 → XP_046767157.1  ras-related protein Rab-5A isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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