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CYCS cytochrome c, somatic [ Gallus gallus (chicken) ]

Gene ID: 420624, updated on 5-Mar-2024

Summary

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Symbol
CYCSprovided by CGNC
Full Name
cytochrome c, somaticprovided by CGNC
Primary source
CGNC:8375
See related
Ensembl:ENSGALG00010002409
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CYC
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (31665440..31667933, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (31716718..31719212, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein like 3 Neighboring gene uncharacterized LOC121110126 Neighboring gene C7orf31 homolog Neighboring gene neuropeptide VF precursor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation and characterization of two alleles of the chicken cytochrome c gene. Limbach KJ, et al. Nucleic Acids Res, 1983 Dec 20. PMID 6324108, Free PMC Article
  2. Amino acid sequence of chicken heart cytochrome c. Chan SK, et al. J Biol Chem, 1966 Jan 25. PMID 5903744
  3. The role of mitochondria, cytochrome c and caspase-9 in embryonic lens fibre cell denucleation. Sanders EJ, et al. J Anat, 2002 Aug. PMID 12220121, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, cytochrome c to oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial electron transport, ubiquinol to cytochrome c IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cysteine-type endopeptidase activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial intermembrane space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome c

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079478.2 → NP_001072946.1  cytochrome c

    See identical proteins and their annotated locations for NP_001072946.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000037
    UniProtKB/Swiss-Prot
    P00016, P67881, Q9PRU4
    Related
    ENSGALP00010003370.1, ENSGALT00010005531.1
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  2. NM_001398298.1 → NP_001385227.1  cytochrome c

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000037
    UniProtKB/Swiss-Prot
    P00016, P67881, Q9PRU4
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  3. NM_001398299.1 → NP_001385228.1  cytochrome c

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000037
    UniProtKB/Swiss-Prot
    P00016, P67881, Q9PRU4
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    31665440..31667933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    31716718..31719212 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P67881.2 GenPept UniProtKB/Swiss-Prot:P67881

Gene LinkOut

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