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ABI1 abl interactor 1 [ Gallus gallus (chicken) ]

Gene ID: 420489, updated on 5-Mar-2024

Summary

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Symbol
ABI1provided by CGNC
Full Name
abl interactor 1provided by CGNC
Primary source
CGNC:51267
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (15923859..16004037)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (15951679..16032088)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene microtubule associated serine/threonine kinase like Neighboring gene acyl-CoA binding domain containing 5 Neighboring gene prenyl (decaprenyl) diphosphate synthase, subunit 1 Neighboring gene selenoprotein O like Neighboring gene uncharacterized LOC121110046 Neighboring gene amyloid beta precursor protein binding family B member 1 interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
abl interactor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039281.3 → NP_001034370.3  abl interactor 1

    Status: PROVISIONAL

    Source sequence(s)
    AJ396434, JAENSK010000036

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    15923859..16004037
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040680681.2 → XP_040536615.1  abl interactor 1 isoform X3

    Conserved Domains (1) summary
    cd11971
    Location:421 → 479
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1

  2. XM_040680723.2 → XP_040536657.1  abl interactor 1 isoform X7

    Conserved Domains (2) summary
    cd11971
    Location:391 → 449
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 156
    Abi_HHR; Abl-interactor HHR

  3. XM_040680755.2 → XP_040536689.1  abl interactor 1 isoform X11

    Conserved Domains (2) summary
    cd11971
    Location:362 → 420
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 156
    Abi_HHR; Abl-interactor HHR

  4. XM_040680670.2 → XP_040536604.1  abl interactor 1 isoform X2

    Conserved Domains (1) summary
    cd11971
    Location:423 → 481
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1

  5. XM_040680713.2 → XP_040536647.1  abl interactor 1 isoform X6

    Conserved Domains (1) summary
    cd11971
    Location:394 → 452
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1

  6. XM_040680752.2 → XP_040536686.1  abl interactor 1 isoform X10

    Conserved Domains (2) summary
    cd11971
    Location:364 → 422
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 156
    Abi_HHR; Abl-interactor HHR

  7. XM_040680784.2 → XP_040536718.1  abl interactor 1 isoform X14

    Conserved Domains (2) summary
    cd11971
    Location:335 → 393
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 156
    Abi_HHR; Abl-interactor HHR

  8. XM_040680660.2 → XP_040536594.1  abl interactor 1 isoform X1

    Conserved Domains (1) summary
    cd11971
    Location:445 → 503
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1

  9. XM_040680703.2 → XP_040536637.1  abl interactor 1 isoform X5

    Conserved Domains (1) summary
    cd11971
    Location:416 → 474
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1

  10. XM_040680743.2 → XP_040536677.1  abl interactor 1 isoform X9

    Conserved Domains (1) summary
    cd11971
    Location:386 → 444
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1

  11. XM_040680774.2 → XP_040536708.1  abl interactor 1 isoform X13

    Conserved Domains (2) summary
    cd11971
    Location:357 → 415
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 154
    Abi_HHR; Abl-interactor HHR

  12. XM_040680692.2 → XP_040536626.1  abl interactor 1 isoform X4

    Conserved Domains (1) summary
    cd11971
    Location:418 → 476
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1

  13. XM_040680733.2 → XP_040536667.1  abl interactor 1 isoform X8

    Conserved Domains (1) summary
    cd11971
    Location:389 → 447
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1

  14. XM_046921857.1 → XP_046777813.1  abl interactor 1 isoform X12

  15. XM_040680795.2 → XP_040536729.1  abl interactor 1 isoform X15

    Conserved Domains (2) summary
    cd11971
    Location:330 → 388
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 154
    Abi_HHR; Abl-interactor HHR

  16. XM_046921862.1 → XP_046777818.1  abl interactor 1 isoform X16

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    15951679..16032088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046910968.1 → XP_046766924.1  abl interactor 1 isoform X3

  2. XM_046910972.1 → XP_046766928.1  abl interactor 1 isoform X7

  3. XM_046910976.1 → XP_046766932.1  abl interactor 1 isoform X11

  4. XM_046910967.1 → XP_046766923.1  abl interactor 1 isoform X2

  5. XM_046910971.1 → XP_046766927.1  abl interactor 1 isoform X6

  6. XM_046910975.1 → XP_046766931.1  abl interactor 1 isoform X10

  7. XM_046910979.1 → XP_046766935.1  abl interactor 1 isoform X14

  8. XM_046910966.1 → XP_046766922.1  abl interactor 1 isoform X1

    Conserved Domains (2) summary
    cd11971
    Location:445 → 503
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 154
    Abi_HHR; Abl-interactor HHR

  9. XM_046910970.1 → XP_046766926.1  abl interactor 1 isoform X5

    Conserved Domains (2) summary
    cd11971
    Location:416 → 474
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 154
    Abi_HHR; Abl-interactor HHR

  10. XM_046910974.1 → XP_046766930.1  abl interactor 1 isoform X9

  11. XM_046910978.1 → XP_046766934.1  abl interactor 1 isoform X13

    Conserved Domains (2) summary
    cd11971
    Location:357 → 415
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 154
    Abi_HHR; Abl-interactor HHR

  12. XM_046910969.1 → XP_046766925.1  abl interactor 1 isoform X4

  13. XM_046910973.1 → XP_046766929.1  abl interactor 1 isoform X8

  14. XM_046910977.1 → XP_046766933.1  abl interactor 1 isoform X12

  15. XM_046910980.1 → XP_046766936.1  abl interactor 1 isoform X15

  16. XM_046910981.1 → XP_046766937.1  abl interactor 1 isoform X16

Nucleotide Protein Strain
Heading Accession and Version

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