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E2F5 E2F transcription factor 5 [ Gallus gallus (chicken) ]

Gene ID: 420206, updated on 3-Apr-2024

Summary

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Symbol
E2F5provided by CGNC
Full Name
E2F transcription factor 5provided by CGNC
Primary source
CGNC:51204
See related
Ensembl:ENSGALG00010013250
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (122293724..122306269)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (122485839..122498386)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 7 member 13 Neighboring gene leucine rich repeat and coiled-coil centrosomal protein 1 Neighboring gene chromosome 8 open reading frame 59 Neighboring gene carbonic anhydrase 13 Neighboring gene carbonic anhydrase 3A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor E2F5
Names
E2F transcription factor 5, p130-binding

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030942.1 → NP_001026113.1  transcription factor E2F5

    See identical proteins and their annotated locations for NP_001026113.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ720953
    UniProtKB/TrEMBL
    F1NEK4, Q5ZI31
    Related
    ENSGALP00010018663.1, ENSGALT00010031859.1
    Conserved Domains (3) summary
    cd14660
    Location:93 → 197
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:17 → 81
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam04425
    Location:241 → 335
    Bul1_N; Bul1 N terminus

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    122293724..122306269
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015282807.4 → XP_015138293.2  transcription factor E2F5 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YJB9
    Conserved Domains (3) summary
    cd14660
    Location:93 → 197
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:16 → 81
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    cl27571
    Location:147 → 306
    ArfGap; Putative GTPase activating protein for Arf

  2. XM_040678085.2 → XP_040534019.1  transcription factor E2F5 isoform X2

    Conserved Domains (2) summary
    PRK14948
    Location:49 → 142
    PRK14948; DNA polymerase III subunit gamma/tau
    cd14660
    Location:1 → 71
    E2F_DD; Dimerization domain of E2F transcription factors

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    122485839..122498386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046910653.1 → XP_046766609.1  transcription factor E2F5 isoform X1

  2. XM_046910654.1 → XP_046766610.1  transcription factor E2F5 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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