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MSC musculin [ Gallus gallus (chicken) ]

Gene ID: 420179, updated on 5-Mar-2024

Summary

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Symbol
MSCprovided by CGNC
Full Name
musculinprovided by CGNC
Primary source
CGNC:13879
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (116923330..116925515, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (116927249..116929433, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene uncharacterized LOC121109873 Neighboring gene transient receptor potential cation channel subfamily A member 1 Neighboring gene uncharacterized LOC124417746

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
musculin
Names
musculin (activated B-cell factor-1)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    116923330..116925515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_418293.8 → XP_418293.6  musculin

    Conserved Domains (1) summary
    cd19703
    Location:100 → 165
    bHLH_TS_musculin; basic helix-loop-helix (bHLH) domain found in musculin and similar proteins

  2. XM_015282880.4 → XP_015138366.2  musculin

    Conserved Domains (1) summary
    cd19703
    Location:100 → 165
    bHLH_TS_musculin; basic helix-loop-helix (bHLH) domain found in musculin and similar proteins

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    116927249..116929433 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040664666.2 → XP_040520600.1  musculin

    Conserved Domains (1) summary
    cd19703
    Location:100 → 165
    bHLH_TS_musculin; basic helix-loop-helix (bHLH) domain found in musculin and similar proteins

  2. XM_046912344.1 → XP_046768300.1  musculin

Nucleotide Protein
Heading Accession and Version

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