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PIP4K2B phosphatidylinositol-5-phosphate 4-kinase type 2 beta [ Gallus gallus (chicken) ]

Gene ID: 419999, updated on 3-Apr-2024

Summary

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Symbol
PIP4K2Bprovided by CGNC
Full Name
phosphatidylinositol-5-phosphate 4-kinase type 2 betaprovided by CGNC
Primary source
CGNC:1118
See related
Ensembl:ENSGALG00010022151
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
PIP5K2B
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 27
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 27 NC_052558.1 (4003829..4020952, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 27 NC_052599.1 (5166346..5183452, complement)

Chromosome 27 - NC_052558.1Genomic Context describing neighboring genes Neighboring gene polycomb group ring finger 2 Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene proteasome subunit beta 3 Neighboring gene CWC25 spliceosome associated protein homolog Neighboring gene transfer RNA cysteine (anticodon GCA)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic tagging reveals a random association of endogenous PtdIns5P 4-kinases IIalpha and IIbeta and a partial nuclear localization of the IIalpha isoform. Wang M, et al. Biochem J, 2010 Sep 1. PMID 20569199, Free PMC Article
  2. Genomic tagging of endogenous type IIbeta phosphatidylinositol 5-phosphate 4-kinase in DT40 cells reveals a nuclear localisation. Richardson JP, et al. Cell Signal, 2007 Jun. PMID 17303380, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. PIPkin IIbeta is expressed as a tagged protein, is active as revealed by immunoprecipitation and enzyme assay, and that cellular fractionation reveals that it is indeed nuclear.
    Title: Genomic tagging of endogenous type IIbeta phosphatidylinositol 5-phosphate 4-kinase in DT40 cells reveals a nuclear localisation.
  2. Dimerization of PIP4K2B and PIP4K2A is complete and random, governed by the relative concentrations.
    Title: Genomic tagging reveals a random association of endogenous PtdIns5P 4-kinases IIalpha and IIbeta and a partial nuclear localization of the IIalpha isoform.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 5-phosphate 4-kinase type-2 beta
Names
phosphatidylinositol-4-phosphate 5-kinase, type II, beta
phosphatidylinositol-5-phosphate 4-kinase, type II, beta
XP_015155004.1
XP_040509274.1
XP_040547968.1
XP_040547970.1
XP_046760420.1
XP_046789510.1
XP_046789511.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052558.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4003829..4020952 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015299518.4 → XP_015155004.1  phosphatidylinositol 5-phosphate 4-kinase type-2 beta isoform X1

    UniProtKB/TrEMBL
    A0A1D5PV96, A0A8V0ZGK7
    Related
    ENSGALP00010032454.1, ENSGALT00010053898.1
    Conserved Domains (1) summary
    cd17310
    Location:36 → 419
    PIPKc_PIP5K2B; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in Phosphatidylinositol 5-phosphate 4-kinase type-2 beta (PIP5K2B) and similar proteins

  2. XM_046904464.1 → XP_046760420.1  phosphatidylinositol 5-phosphate 4-kinase type-2 beta isoform X3

  3. XM_040653340.1 → XP_040509274.1  phosphatidylinositol 5-phosphate 4-kinase type-2 beta isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZGK7
    Conserved Domains (1) summary
    cl28923
    Location:13 → 372
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052599.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5166346..5183452 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040692034.2 → XP_040547968.1  phosphatidylinositol 5-phosphate 4-kinase type-2 beta isoform X1

    UniProtKB/TrEMBL
    A0A1D5PV96, A0A8V0ZGK7
    Conserved Domains (1) summary
    cd17310
    Location:36 → 419
    PIPKc_PIP5K2B; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in Phosphatidylinositol 5-phosphate 4-kinase type-2 beta (PIP5K2B) and similar proteins

  2. XM_046933555.1 → XP_046789511.1  phosphatidylinositol 5-phosphate 4-kinase type-2 beta isoform X3

  3. XM_040692036.2 → XP_040547970.1  phosphatidylinositol 5-phosphate 4-kinase type-2 beta isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZGK7
    Conserved Domains (1) summary
    cl28923
    Location:13 → 372
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  4. XM_046933554.1 → XP_046789510.1  phosphatidylinositol 5-phosphate 4-kinase type-2 beta isoform X3

Nucleotide Protein Strain
Heading Accession and Version

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