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TFDP3 transcription factor Dp family member 3 [ Gallus gallus (chicken) ]

Gene ID: 418739, updated on 3-Apr-2024

Summary

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Symbol
TFDP3provided by CGNC
Full Name
transcription factor Dp family member 3provided by CGNC
Primary source
CGNC:12621
See related
Ensembl:ENSGALG00010016472
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
TFDP1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (137318349..137359679, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (137317510..137358831, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 255B Neighboring gene ATPase H+/K+ transporting beta subunit Neighboring gene transmembrane and coiled-coil domains 3 Neighboring gene defective in cullin neddylation 1 domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor Dp-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    137318349..137359679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015277904.4 → XP_015133390.1  transcription factor Dp-1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YW23
    Conserved Domains (3) summary
    cd14458
    Location:198 → 244
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:113 → 193
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:200 → 338
    DP; Transcription factor DP

  2. XM_015277902.4 → XP_015133388.1  transcription factor Dp-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YW23, A0A8V0YW27
    Related
    ENSGALP00010022965.1, ENSGALT00010039706.1
    Conserved Domains (3) summary
    cd14458
    Location:199 → 245
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:113 → 194
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:201 → 339
    DP; Transcription factor DP

  3. XM_015277905.4 → XP_015133391.1  transcription factor Dp-1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YW23
    Conserved Domains (3) summary
    cd14458
    Location:198 → 244
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:113 → 193
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:200 → 338
    DP; Transcription factor DP

  4. XM_015277903.4 → XP_015133389.1  transcription factor Dp-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YW23, A0A8V0YW27
    Conserved Domains (3) summary
    cd14458
    Location:199 → 245
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:113 → 194
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:201 → 339
    DP; Transcription factor DP

  5. XM_046906675.1 → XP_046762631.1  transcription factor Dp-1 isoform X5

  6. XM_004938530.5 → XP_004938587.1  transcription factor Dp-1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0YPL9, A0A8V0YWF1
    Related
    ENSGALP00010022948.1, ENSGALT00010039689.1
    Conserved Domains (3) summary
    cd14458
    Location:197 → 243
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:111 → 192
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:199 → 337
    DP; Transcription factor DP

  7. XM_046906640.1 → XP_046762596.1  transcription factor Dp-1 isoform X1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    137317510..137358831 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040659604.2 → XP_040515538.1  transcription factor Dp-1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YW23
    Conserved Domains (3) summary
    cd14458
    Location:198 → 244
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:113 → 193
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:200 → 338
    DP; Transcription factor DP

  2. XM_040659602.2 → XP_040515536.1  transcription factor Dp-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YW23, A0A8V0YW27
    Conserved Domains (3) summary
    cd14458
    Location:199 → 245
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:113 → 194
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:201 → 339
    DP; Transcription factor DP

  3. XM_040659605.2 → XP_040515539.1  transcription factor Dp-1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YW23
    Conserved Domains (3) summary
    cd14458
    Location:198 → 244
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:113 → 193
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:200 → 338
    DP; Transcription factor DP

  4. XM_040659603.2 → XP_040515537.1  transcription factor Dp-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YW23, A0A8V0YW27
    Conserved Domains (3) summary
    cd14458
    Location:199 → 245
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:113 → 194
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:201 → 339
    DP; Transcription factor DP

  5. XM_046909178.1 → XP_046765134.1  transcription factor Dp-1 isoform X5

  6. XM_040659606.2 → XP_040515540.1  transcription factor Dp-1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0YPL9, A0A8V0YWF1
    Conserved Domains (3) summary
    cd14458
    Location:197 → 243
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:111 → 192
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:199 → 337
    DP; Transcription factor DP

  7. XM_046909177.1 → XP_046765133.1  transcription factor Dp-1 isoform X1

Nucleotide Protein
Heading Accession and Version

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