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MMP17 matrix metallopeptidase 17 [ Gallus gallus (chicken) ]

Gene ID: 416801, updated on 3-Apr-2024

Summary

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Symbol
MMP17provided by CGNC
Full Name
matrix metallopeptidase 17provided by CGNC
Primary source
CGNC:1761
See related
Ensembl:ENSGALG00010022900
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (2737742..2780963, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (2741295..2784672, complement)

Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121106872 Neighboring gene pseudouridylate synthase 1 Neighboring gene unc-51 like autophagy activating kinase 1 Neighboring gene uncharacterized LOC121106881 Neighboring gene uncharacterized LOC121106882 Neighboring gene splicing factor SWAP homolog Neighboring gene adhesion G protein-coupled receptor D1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
matrix metalloproteinase-17
Names
matrix metallopeptidase 17 (membrane-inserted)
XP_015131123.1
XP_040504272.1
XP_040540294.1
XP_040540295.1
XP_046757180.1
XP_046784285.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    2737742..2780963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015275637.4 → XP_015131123.1  matrix metalloproteinase-17 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZQJ1, A0A8V0ZTB2
    Related
    ENSGALP00010033753.1, ENSGALT00010055743.1
    Conserved Domains (3) summary
    cd00094
    Location:323 → 517
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    cd04278
    Location:121 → 284
    ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...
    pfam01471
    Location:45 → 95
    PG_binding_1; Putative peptidoglycan binding domain

  2. XM_040648338.2 → XP_040504272.1  matrix metalloproteinase-17 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZTA8
    Conserved Domains (2) summary
    cd00094
    Location:328 → 522
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    cd04278
    Location:126 → 289
    ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

  3. XM_046901224.1 → XP_046757180.1  matrix metalloproteinase-17 isoform X3

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    2741295..2784672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040684361.2 → XP_040540295.1  matrix metalloproteinase-17 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZQJ1, A0A8V0ZTB2
    Conserved Domains (3) summary
    cd00094
    Location:323 → 517
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    cd04278
    Location:121 → 284
    ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...
    pfam01471
    Location:45 → 95
    PG_binding_1; Putative peptidoglycan binding domain

  2. XM_040684360.2 → XP_040540294.1  matrix metalloproteinase-17 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZTA8
    Conserved Domains (2) summary
    cd00094
    Location:328 → 522
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    cd04278
    Location:126 → 289
    ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

  3. XM_046928329.1 → XP_046784285.1  matrix metalloproteinase-17 isoform X3

Nucleotide Protein
Heading Accession and Version

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