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ZFPM1 zinc finger protein, FOG family member 1 [ Gallus gallus (chicken) ]

Gene ID: 415835, updated on 5-Mar-2024

Summary

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Symbol
ZFPM1provided by CGNC
Full Name
zinc finger protein, FOG family member 1provided by CGNC
Primary source
CGNC:4577
See related
Ensembl:ENSGALG00010009511
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (17988120..18017552)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (18336313..18365634)

Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene BTG3 associated nuclear protein Neighboring gene zinc finger protein 469 Neighboring gene zinc finger CCCH-type containing 18 Neighboring gene cell death inducing DFFA like effector c Neighboring gene microRNA 1571

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II-specific DNA-binding transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in erythrocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in megakaryocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZFPM1
Names
zinc finger protein, multitype 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    17988120..18017552
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025154289.3 → XP_025010057.2  zinc finger protein ZFPM1 isoform X1

    Conserved Domains (4) summary
    PHA00733
    Location:339 → 394
    PHA00733; hypothetical protein
    PHA02682
    Location:404 → 476
    PHA02682; ORF080 virion core protein; Provisional
    sd00017
    Location:315 → 334
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl40432
    Location:111 → 216
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

  2. XM_004944288.5 → XP_004944345.3  zinc finger protein ZFPM1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XXX3
    Related
    ENSGALP00010013124.1, ENSGALT00010022713.1
    Conserved Domains (4) summary
    PHA00733
    Location:338 → 393
    PHA00733; hypothetical protein
    PHA02682
    Location:403 → 475
    PHA02682; ORF080 virion core protein; Provisional
    sd00017
    Location:314 → 333
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl40432
    Location:111 → 215
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

  3. XM_025154290.3 → XP_025010058.2  zinc finger protein ZFPM1 isoform X3

    Conserved Domains (4) summary
    PHA00733
    Location:318 → 373
    PHA00733; hypothetical protein
    PHA02682
    Location:383 → 455
    PHA02682; ORF080 virion core protein; Provisional
    sd00017
    Location:294 → 313
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl40432
    Location:86 → 195
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

  4. XM_414197.8 → XP_414197.6  zinc finger protein ZFPM1 isoform X4

    Conserved Domains (4) summary
    PHA00733
    Location:317 → 372
    PHA00733; hypothetical protein
    PHA02682
    Location:382 → 454
    PHA02682; ORF080 virion core protein; Provisional
    sd00017
    Location:293 → 312
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd19215
    Location:86 → 194
    PR-SET_ZFPM1; PR-SET domain found in zinc finger protein ZFPM1 and similar proteins

  5. XM_040707271.2 → XP_040563205.1  zinc finger protein ZFPM1 isoform X5

    Conserved Domains (3) summary
    PHA00733
    Location:132 → 187
    PHA00733; hypothetical protein
    PHA02682
    Location:197 → 269
    PHA02682; ORF080 virion core protein; Provisional
    sd00017
    Location:108 → 127
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    18336313..18365634
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040681426.2 → XP_040537360.1  zinc finger protein ZFPM1 isoform X1

    Conserved Domains (4) summary
    PHA00733
    Location:339 → 394
    PHA00733; hypothetical protein
    PHA02682
    Location:404 → 476
    PHA02682; ORF080 virion core protein; Provisional
    sd00017
    Location:315 → 334
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl40432
    Location:111 → 216
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

  2. XM_040681427.2 → XP_040537361.1  zinc finger protein ZFPM1 isoform X2

    Conserved Domains (4) summary
    PHA00733
    Location:338 → 393
    PHA00733; hypothetical protein
    PHA02682
    Location:403 → 475
    PHA02682; ORF080 virion core protein; Provisional
    sd00017
    Location:314 → 333
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl40432
    Location:111 → 215
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

  3. XM_040681428.2 → XP_040537362.1  zinc finger protein ZFPM1 isoform X3

    Conserved Domains (4) summary
    PHA00733
    Location:318 → 373
    PHA00733; hypothetical protein
    PHA02682
    Location:383 → 455
    PHA02682; ORF080 virion core protein; Provisional
    sd00017
    Location:294 → 313
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl40432
    Location:86 → 195
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily

  4. XM_040681429.2 → XP_040537363.1  zinc finger protein ZFPM1 isoform X4

    Conserved Domains (4) summary
    PHA00733
    Location:317 → 372
    PHA00733; hypothetical protein
    PHA02682
    Location:382 → 454
    PHA02682; ORF080 virion core protein; Provisional
    sd00017
    Location:293 → 312
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd19215
    Location:86 → 194
    PR-SET_ZFPM1; PR-SET domain found in zinc finger protein ZFPM1 and similar proteins

  5. XM_040681430.2 → XP_040537364.1  zinc finger protein ZFPM1 isoform X5

    Conserved Domains (3) summary
    PHA00733
    Location:132 → 187
    PHA00733; hypothetical protein
    PHA02682
    Location:197 → 269
    PHA02682; ORF080 virion core protein; Provisional
    sd00017
    Location:108 → 127
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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