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eIF3f1 eukaryotic translation initiation factor 3 subunit f1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40587, updated on 4-Apr-2024

Summary

Official Symbol
eIF3f1provided by FlyBase
Official Full Name
eukaryotic translation initiation factor 3 subunit f1provided by FlyBase
Primary source
FLYBASE:FBgn0037270
Locus tag
Dmel_CG9769
See related
AllianceGenome:FB:FBgn0037270
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG9769; Dmel\CG9769; eIF3-S5; eif3f; eIF3f; Q9VN50
Summary
Predicted to enable deubiquitinase activity and translation initiation factor binding activity. Predicted to contribute to translation initiation factor activity. Involved in positive regulation of Notch signaling pathway. Predicted to be part of eukaryotic translation initiation factor 3 complex, eIF3m. Is expressed in adult head and organism. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human EIF3F (eukaryotic translation initiation factor 3 subunit F). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
82D2-82D2; 3-47.1 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (4712882..4714182, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (538604..539904, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene smallish Neighboring gene long non-coding RNA:CR44157 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44923 Neighboring gene Neprilysin 2

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables metal-dependent deubiquitinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables peptidase activity IEA
Inferred from Electronic Annotation
more info
 
contributes_to translation initiation factor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 
contributes_to translation initiation factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables translation initiation factor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables translation initiation factor binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein deubiquitination ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in translational initiation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 
involved_in translational initiation ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of eukaryotic translation initiation factor 3 complex IEA
Inferred from Electronic Annotation
more info
 
part_of eukaryotic translation initiation factor 3 complex ISS
Inferred from Sequence or Structural Similarity
more info
 
part_of eukaryotic translation initiation factor 3 complex, eIF3m IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
eukaryotic translation initiation factor 3 subunit f1
Names
CG9769-PA
eIF3f1-PA
NP_649489.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    4712882..4714182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_141232.3NP_649489.1  eukaryotic translation initiation factor 3 subunit f1 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649489.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VN50
    Related
    FBpp0078532
    Conserved Domains (1) summary
    cd08064
    Location:8274
    MPN_eIF3f; Mpr1p, Pad1p N-terminal (MPN) domains without catalytic isopeptidase activity, found in eIF3f