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STXBP1 syntaxin binding protein 1 [ Gallus gallus (chicken) ]

Gene ID: 404293, updated on 3-Apr-2024

Summary

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Symbol
STXBP1provided by CGNC
Full Name
syntaxin binding protein 1provided by CGNC
Primary source
CGNC:49872
See related
Ensembl:ENSGALG00010028893
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
N-Sec1; Unc18-1; unc-18A; unc-18-1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
20
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (3111836..3126621)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (2520303..2535018)

Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene collagen type I alpha 4 chain Neighboring gene solute carrier family 31 member 2 Neighboring gene family with sequence similarity 129 member B Neighboring gene microRNA 7442 Neighboring gene AT-hook transcription factor Neighboring gene whirlin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables syntaxin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking involved in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in secretory granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-binding protein 1
Names
protein unc-18 homolog 1
protein unc-18 homolog A
syntaxin 1-binding protein
unc-18 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001305648.1 → NP_001292577.1  syntaxin-binding protein 1

    See identical proteins and their annotated locations for NP_001292577.1

    Status: VALIDATED

    Source sequence(s)
    BU247213, BU378879, DN928391, JAENSK010000308
    UniProtKB/TrEMBL
    A0A8V1AAL7
    Conserved Domains (1) summary
    pfam00995
    Location:15 → 561
    Sec1; Sec1 family

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    3111836..3126621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015279347.4 → XP_015134833.1  syntaxin-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5PK28, A0A8V1AFZ2
    Related
    ENSGALP00010043027.1, ENSGALT00010069901.1
    Conserved Domains (1) summary
    pfam00995
    Location:29 → 575
    Sec1; Sec1 family

  2. XM_015279346.4 → XP_015134832.1  syntaxin-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PHU2, A0A8V1AFZ2
    Related
    ENSGALP00010043025.1, ENSGALT00010069899.1
    Conserved Domains (1) summary
    pfam00995
    Location:29 → 575
    Sec1; Sec1 family

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    2520303..2535018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046928790.1 → XP_046784746.1  syntaxin-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5PK28

  2. XM_046928789.1 → XP_046784745.1  syntaxin-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PHU2

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_206976.1: Suppressed sequence

    Description
    NM_206976.1: This RefSeq was permanently suppressed because it was based on a sequence from a different organism.
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6R748.1 GenPept UniProtKB/Swiss-Prot:Q6R748

Gene LinkOut

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