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GYS2 glycogen synthase 2 [ Canis lupus familiaris (dog) ]

Gene ID: 403737, updated on 5-Mar-2024

Summary

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Official Symbol
GYS2provided by VGNC
Official Full Name
glycogen synthase 2provided by VGNC
Primary source
VGNC:VGNC:41575
See related
Ensembl:ENSCAFG00845014730
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 27
Exon count:
16
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (25732712..25788382)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (20792441..20848094, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (20968756..21018506, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (25531505..25581297)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (25554947..25604305)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene potassium inwardly rectifying channel subfamily J member 8 Neighboring gene lactate dehydrogenase B Neighboring gene spexin hormone Neighboring gene golgi transport 1B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen (starch) synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen [starch] synthase, liver
Names
glycogen synthase 2 (liver)
XP_038294718.1
XP_038369390.1
XP_038432083.1
XP_038497189.1
XP_534869.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    25732712..25788382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038438790.1 → XP_038294718.1  glycogen [starch] synthase, liver

    UniProtKB/TrEMBL
    A0A8C0K4E9, A0A8C0P678, A0A8I3NVF0
    Related
    ENSCAFP00845020764.1, ENSCAFT00845026339.1
    Conserved Domains (1) summary
    pfam05693
    Location:32 → 636
    Glycogen_syn; Glycogen synthase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    25531505..25581297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038513462.1 → XP_038369390.1  glycogen [starch] synthase, liver

    Conserved Domains (1) summary
    pfam05693
    Location:32 → 636
    Glycogen_syn; Glycogen synthase

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    25554947..25604305
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038641261.1 → XP_038497189.1  glycogen [starch] synthase, liver

    Conserved Domains (1) summary
    pfam05693
    Location:32 → 636
    Glycogen_syn; Glycogen synthase

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    20968756..21018506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038576155.1 → XP_038432083.1  glycogen [starch] synthase, liver

    UniProtKB/TrEMBL
    A0A8C0K4E9, A0A8C0P678, A0A8I3NVF0
    Conserved Domains (1) summary
    pfam05693
    Location:32 → 636
    Glycogen_syn; Glycogen synthase

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    20792441..20848094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_534869.7 → XP_534869.2  glycogen [starch] synthase, liver

    UniProtKB/TrEMBL
    A0A8C0K4E9, A0A8C0P678, A0A8I3NVF0
    Conserved Domains (1) summary
    pfam05693
    Location:32 → 636
    Glycogen_syn; Glycogen synthase
Nucleotide Protein
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