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Rpn12 Regulatory particle non-ATPase 12 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 39845, updated on 5-May-2024

Summary

Official Symbol
Rpn12provided by FlyBase
Official Full Name
Regulatory particle non-ATPase 12provided by FlyBase
Primary source
FLYBASE:FBgn0028693
Locus tag
Dmel_CG4157
See related
AllianceGenome:FB:FBgn0028693
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG4157; Dmel\CG4157; dRpn12; p30; rpn12; S14
Summary
Involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Part of proteasome regulatory particle. Is expressed in adult head; adult heart; and organism. Orthologous to human PSMD8 (proteasome 26S subunit, non-ATPase 8). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
73A10-73A10; 3-44 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16583028..16584022)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16576128..16577122)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene survival motor neuron Neighboring gene pseudo Neighboring gene Ubiquinol-cytochrome c reductase core protein 2 Neighboring gene Syntaxin 8 Neighboring gene antisense RNA:CR45895 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of proteasome complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of proteasome regulatory particle IDA
Inferred from Direct Assay
more info
PubMed 
part_of proteasome regulatory particle IEA
Inferred from Electronic Annotation
more info
 
part_of proteasome regulatory particle ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
part_of proteasome regulatory particle, lid subcomplex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of proteasome regulatory particle, lid subcomplex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
regulatory particle non-ATPase 12
Names
CG4157-PA
Rpn12-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    16583028..16584022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140647.4NP_648904.1  regulatory particle non-ATPase 12 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_648904.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9V436
    Related
    FBpp0075068
    Conserved Domains (1) summary
    pfam10075
    Location:119230
    CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family