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SCP2 sterol carrier protein 2 [ Gallus gallus (chicken) ]

Gene ID: 396550, updated on 5-Mar-2024

Summary

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Symbol
SCP2provided by CGNC
Full Name
sterol carrier protein 2provided by CGNC
Primary source
CGNC:49864
See related
Ensembl:ENSGALG00010025057
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SCPX; SCP-2; SCP-X; NSL-TP
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
16
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (24221653..24233804)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (24233905..24246052)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene zyg-11 family member A, cell cycle regulator Neighboring gene cytochrome c oxidase assembly factor 7 (putative) Neighboring gene uncharacterized LOC107054037 Neighboring gene enoyl-CoA hydratase domain containing 2 Neighboring gene podocan Neighboring gene carnitine palmitoyltransferase 2 Neighboring gene solute carrier family 1 member 7 Neighboring gene microRNA 6623 Neighboring gene uncharacterized LOC124418131 Neighboring gene CXXC motif containing zinc binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chicken sterol carrier protein 2/sterol carrier protein x: cDNA cloning reveals evolutionary conservation of structure and regulated expression. Pfeifer SM, et al. Arch Biochem Biophys, 1993 Jul. PMID 8323294
  2. Gene expression profiling of chicken primordial germ cell ESTs. Han JY, et al. BMC Genomics, 2006 Aug 30. PMID 16939661, Free PMC Article
  3. Analysis of chicken embryonic gonad expressed sequenced tags. Shin JH, et al. Anim Genet, 2006 Feb. PMID 16441308
  4. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol carrier protein 2
Names
SCP-2/3-oxoacyl-CoA thiolase
SCP-2/thiolase
SCP-chi
acetyl-CoA C-myristoyltransferase
non-specific lipid-transfer protein
propanoyl-CoA C-acyltransferase
sterol carrier protein X
NP_001292129.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001305200.2 → NP_001292129.1  sterol carrier protein 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000239
    UniProtKB/Swiss-Prot
    Q07598
    Related
    ENSGALP00010037842.1, ENSGALT00010061167.1
    Conserved Domains (3) summary
    PRK08256
    Location:3 → 393
    PRK08256; lipid-transfer protein; Provisional
    cd00826
    Location:8 → 393
    nondecarbox_cond_enzymes; nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 ...
    pfam02036
    Location:424 → 525
    SCP2; SCP-2 sterol transfer family

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    24221653..24233804
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    24233905..24246052
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q07598.1 GenPept UniProtKB/Swiss-Prot:Q07598

Gene LinkOut

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