OPN1MSW opsin, green sensitive (rhodopsin-like) [Gallus gallus (chicken)] - Gene

Summary

Official Symbol: OPN1MSWprovided by CGNC
Official Full Name: opsin, green sensitive (rhodopsin-like)provided by CGNC
Primary source: CGNC:14306
See related: Ensembl:ENSGALG00010027226
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as: RHO; OPNG; PRA1; CHK-1
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Genomic context

Location:: chromosome: 26

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	26	NC_052557.1 (4597817..4603444, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	26	NC_052598.1 (4565476..4571102, complement)

Chromosome 26 - NC_052557.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

The increase in rhodopsin mRNA levels evoked by a series of cAMP analogs suggested the response was mediated by protein kinase A.These results suggest a cAMP-mediated signaling pathway may play a role in rod differentiation.
Title: Cyclic AMP-dependent activation of rhodopsin gene transcription in cultured retinal precursor cells of chicken embryo.
The meta-III decay rate is about 700 times faster in chicken green than in rhodopsin; the faster decay of chicken green can be converted to the slower decay in rhodopsin by replacing the residues in chicken green with the corresponding rhodopsin residues.
Title: Amino acid residues responsible for the meta-III decay rates in rod and cone visual pigments.

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables G protein-coupled receptor activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in G protein-coupled receptor signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed
involved_in phototransduction	IEA Inferred from Electronic Annotation more info	PubMed
involved_in visual perception	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in photoreceptor outer segment	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: green-sensitive opsin

Names: green cone photoreceptor pigment; green sensitive cone opsin; opsin CHK-1; opsin, green senitive (rhodopsin-like); rhodopsin (opsin 2, rod pigment) (retinitis pigmentosa 4, autosomal dominant)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_205490.1 → NP_990821.1 green-sensitive opsin

See identical proteins and their annotated locations for NP_990821.1

Status: PROVISIONAL

Source sequence(s)

M92038

UniProtKB/Swiss-Prot

P28683

UniProtKB/TrEMBL

A0A8V1A313

Related

ENSGALP00010040274.1, ENSGALT00010066008.1

Conserved Domains (3) summary

pfam10413
Location:3 → 37

Rhodopsin_N; Amino terminal of the G-protein receptor rhodopsin

cd14964
Location:43 → 64

7tm_GPCRs; TM helix 1 [structural motif]

cl28897
Location:43 → 317

7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

4597817..4603444 complement

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GenBank, FASTA, Sequence Viewer (Graphics)