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SMAD1 SMAD family member 1 [ Gallus gallus (chicken) ]

Gene ID: 395680, updated on 5-Mar-2024

Summary

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Official Symbol
SMAD1provided by CGNC
Official Full Name
SMAD family member 1provided by CGNC
Primary source
CGNC:7584
See related
Ensembl:ENSGALG00010006404
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
20
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (30630743..30738094)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (30582677..30690176)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily E member 1 Neighboring gene OTU deubiquitinase 4 Neighboring gene methylmalonic aciduria (cobalamin deficiency) cblA type Neighboring gene zinc finger protein 827 Neighboring gene uncharacterized LOC124417898

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Retinoic acid promotes expression of germline-specific genes in chicken blastoderm cells by stimulating Smad1/5 phosphorylation in a feeder-free culture system. Tang X, et al. BMC Biotechnol, 2017 Feb 20. PMID 28219352, Free PMC Article
  2. The facial neural crest controls fore- and midbrain patterning by regulating Foxg1 expression through Smad1 activity. Aguiar DP, et al. Development, 2014 Jun. PMID 24917504
  3. Database for chicken full-length cDNAs. Wang Y, et al. Physiol Genomics, 2007 Jan 17. PMID 17105754
  4. Smad1 transcription factor integrates BMP2 and Wnt3a signals in migrating cardiac progenitor cells. Song J, et al. Proc Natl Acad Sci U S A, 2014 May 20. PMID 24808138, Free PMC Article
  5. Retinoic acid regulates bone morphogenic protein signal duration by promoting the degradation of phosphorylated Smad1. Sheng N, et al. Proc Natl Acad Sci U S A, 2010 Nov 2. PMID 20956305, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Our results demonstrated that E8 medium is able to maintain cBC growth for weeks and RA treatment induced germ cell differentiation of cBCs through the BMP-Smad1/5 signaling pathway.
    Title: Retinoic acid promotes expression of germline-specific genes in chicken blastoderm cells by stimulating Smad1/5 phosphorylation in a feeder-free culture system.
  2. Smad1 regulates Foxg1 expression in a pathway that affects fore- and midbrain patterning in the facial neural crest
    Title: The facial neural crest controls fore- and midbrain patterning by regulating Foxg1 expression through Smad1 activity.
  3. SMAD1 has a role in migration of cardiac progenitor cells by integrating BMP2 and Wnt3a signals
    Title: Smad1 transcription factor integrates BMP2 and Wnt3a signals in migrating cardiac progenitor cells.
  4. different levels of BMP signaling regulate Nodal expression by a balance between BMP-pSMAD1/4 signaling and NODAL-pSMAD2/4 signaling
    Title: Multi-modal effects of BMP signaling on Nodal expression in the lateral plate mesoderm during left-right axis formation in the chick embryo.
  5. RA suppresses BMP signaling through regulation of pSmad1 stability.
    Title: Retinoic acid regulates bone morphogenic protein signal duration by promoting the degradation of phosphorylated Smad1.
  6. chondrocytes induce osteoclast formation through RANKL production stimulated by BMP2 and Runx2/Smad1 and thus they may regulate resorption of calcified matrix by osteoclasts at growth plates.
    Title: Murine and chicken chondrocytes regulate osteoclastogenesis by producing RANKL in response to BMP2.
  7. each digital phalanx-forming region has a unique p-SMAD1/5/8 activity signature
    Title: Unique SMAD1/5/8 activity at the phalanx-forming region determines digit identity.
  8. Results describe crosstalk between bone morphogenetic protein-2-associated Smad1 and Runx2 during chondrocyte differentiation and dependence upon both signals for induction of the type X collagen promoter.
    Title: Runx2/Cbfa1 stimulation by retinoic acid is potentiated by BMP2 signaling through interaction with Smad1 on the collagen X promoter in chondrocytes.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables I-SMAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of heteromeric SMAD protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mothers against decapentaplegic homolog 1
Names
BMP pathway effector
BMP signal transducer Smad1
SMAD, mothers against DPP homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001201455.2 → NP_001188384.1  mothers against decapentaplegic homolog 1 isoform 1

    See identical proteins and their annotated locations for NP_001188384.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  2. NM_001397995.1 → NP_001384924.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  3. NM_001398001.1 → NP_001384930.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  4. NM_001398002.1 → NP_001384931.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Related
    ENSGALP00010008962.1, ENSGALT00010015276.1
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  5. NM_001398003.1 → NP_001384932.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  6. NM_001398004.1 → NP_001384933.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  7. NM_001398005.1 → NP_001384934.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  8. NM_001398006.1 → NP_001384935.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  9. NM_001398007.1 → NP_001384936.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  10. NM_001398008.1 → NP_001384937.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  11. NM_001398009.1 → NP_001384938.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  12. NM_001398010.1 → NP_001384939.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  13. NM_001398011.1 → NP_001384940.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  14. NM_001398012.1 → NP_001384941.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  15. NM_001398013.1 → NP_001384942.1  mothers against decapentaplegic homolog 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  16. NM_001398014.1 → NP_001384943.1  mothers against decapentaplegic homolog 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    30630743..30738094
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046939909.1 → XP_046795865.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0

  2. XM_046939910.1 → XP_046795866.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0

  3. XM_046939908.1 → XP_046795864.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0

  4. XM_046939912.1 → XP_046795868.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0

  5. XM_046939911.1 → XP_046795867.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0

  6. XM_040698715.2 → XP_040554649.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0
    Conserved Domains (3) summary
    cd10490
    Location:9 → 132
    MH1_SMAD_1_5_9; N-terminal Mad Homology 1 (MH1) domain in SMAD1, SMAD5 and SMAD9 (also known as SMAD8)
    cd10497
    Location:265 → 465
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:133 → 259
    PRK10263; DNA translocase FtsK; Provisional

  7. XM_046939907.1 → XP_046795863.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0

  8. XM_046939913.1 → XP_046795869.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0

  9. XM_040698720.2 → XP_040554654.1  mothers against decapentaplegic homolog 1 isoform X2

    Conserved Domains (2) summary
    cd10497
    Location:172 → 372
    MH2_SMAD_1_5_9; C-terminal Mad Homology 2 (MH2) domain in SMAD1, SMAD5 and SMAD9
    PRK10263
    Location:39 → 166
    PRK10263; DNA translocase FtsK; Provisional

  10. XM_046939914.1 → XP_046795870.1  mothers against decapentaplegic homolog 1 isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    30582677..30690176
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046915519.1 → XP_046771475.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0

  2. XM_046915518.1 → XP_046771474.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0

  3. XM_046915517.1 → XP_046771473.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0

  4. XM_046915516.1 → XP_046771472.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0

  5. XM_046915515.1 → XP_046771471.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0

  6. XM_046915520.1 → XP_046771476.1  mothers against decapentaplegic homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PBY0, A0A1D6UPR9, F1NGT9, Q56IA0

  7. XM_046915521.1 → XP_046771477.1  mothers against decapentaplegic homolog 1 isoform X3

  8. XM_046915522.1 → XP_046771478.1  mothers against decapentaplegic homolog 1 isoform X3

Nucleotide Protein Strain
Heading Accession and Version

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