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NR2C2 nuclear receptor subfamily 2 group C member 2 [ Gallus gallus (chicken) ]

Gene ID: 395253, updated on 3-Apr-2024

Summary

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Symbol
NR2C2provided by CGNC
Full Name
nuclear receptor subfamily 2 group C member 2provided by CGNC
Primary source
CGNC:6462
See related
Ensembl:ENSGALG00010021978
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
TR4
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
21
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 12 NC_052543.1 (19918963..19956707, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 12 NC_052584.1 (19957210..19994955, complement)

Chromosome 12 - NC_052543.1Genomic Context describing neighboring genes Neighboring gene transmembrane and coiled-coil domain family 1 Neighboring gene thyrotropin releasing hormone Neighboring gene mitochondrial ribosomal protein S25 Neighboring gene rabenosyn, RAB effector Neighboring gene protein IQ-DOMAIN 14-like Neighboring gene FYVE, RhoGEF and PH domain containing 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The nuclear orphan receptor TR4 promotes proliferation of myeloid progenitor cells. Koritschoner NP, et al. Cell Growth Differ, 2001 Nov. PMID 11714637

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor subfamily 2 group C member 2
Names
orphan receptor TR4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052543.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    19918963..19956707 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040646751.2 → XP_040502685.1  nuclear receptor subfamily 2 group C member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZND4
    Related
    ENSGALP00010032208.1, ENSGALT00010053438.1
    Conserved Domains (2) summary
    cd06952
    Location:394 → 572
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:145 → 231
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  2. XM_040646752.2 → XP_040502686.1  nuclear receptor subfamily 2 group C member 2 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PST3, A0A8V0ZTQ4, F1P0B9
    Conserved Domains (2) summary
    cd06952
    Location:361 → 582
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:112 → 198
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  3. XM_414462.8 → XP_414462.3  nuclear receptor subfamily 2 group C member 2 isoform X1

    See identical proteins and their annotated locations for XP_414462.3

    UniProtKB/TrEMBL
    A0A3Q2U2X9, A0A8V0ZTQ4
    Related
    ENSGALP00010032213.1, ENSGALT00010053451.1
    Conserved Domains (2) summary
    cd06952
    Location:394 → 615
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:145 → 231
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  4. XM_040646753.2 → XP_040502687.1  nuclear receptor subfamily 2 group C member 2 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PST3, A0A8V0ZTQ4, F1P0B9
    Related
    ENSGALP00010032219.1, ENSGALT00010053459.1
    Conserved Domains (2) summary
    cd06952
    Location:361 → 582
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:112 → 198
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  5. XM_040646754.2 → XP_040502688.1  nuclear receptor subfamily 2 group C member 2 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PST3, A0A8V0ZTQ4, F1P0B9
    Conserved Domains (2) summary
    cd06952
    Location:361 → 582
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:112 → 198
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  6. XM_040646749.2 → XP_040502683.1  nuclear receptor subfamily 2 group C member 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U2X9, A0A8V0ZTQ4
    Conserved Domains (2) summary
    cd06952
    Location:394 → 615
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:145 → 231
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  7. XM_046900226.1 → XP_046756182.1  nuclear receptor subfamily 2 group C member 2 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PST3, F1P0B9
    Related
    ENSGALP00010032216.1, ENSGALT00010053455.1

  8. XM_046900225.1 → XP_046756181.1  nuclear receptor subfamily 2 group C member 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U2X9

RNA

  1. XR_005839448.2 RNA Sequence

  2. XR_005839447.2 RNA Sequence

  3. XR_005839445.2 RNA Sequence

  4. XR_005839446.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052584.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    19957210..19994955 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040682451.2 → XP_040538385.1  nuclear receptor subfamily 2 group C member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZND4
    Conserved Domains (2) summary
    cd06952
    Location:394 → 572
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:145 → 231
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  2. XM_040682452.2 → XP_040538386.1  nuclear receptor subfamily 2 group C member 2 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PST3, A0A8V0ZTQ4, F1P0B9
    Conserved Domains (2) summary
    cd06952
    Location:361 → 582
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:112 → 198
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  3. XM_040682448.2 → XP_040538382.1  nuclear receptor subfamily 2 group C member 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U2X9, A0A8V0ZTQ4
    Conserved Domains (2) summary
    cd06952
    Location:394 → 615
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:145 → 231
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  4. XM_040682453.2 → XP_040538387.1  nuclear receptor subfamily 2 group C member 2 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PST3, A0A8V0ZTQ4, F1P0B9
    Conserved Domains (2) summary
    cd06952
    Location:361 → 582
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:112 → 198
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  5. XM_040682454.2 → XP_040538388.1  nuclear receptor subfamily 2 group C member 2 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PST3, A0A8V0ZTQ4, F1P0B9
    Conserved Domains (2) summary
    cd06952
    Location:361 → 582
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:112 → 198
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  6. XM_040682449.2 → XP_040538383.1  nuclear receptor subfamily 2 group C member 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U2X9, A0A8V0ZTQ4
    Conserved Domains (2) summary
    cd06952
    Location:394 → 615
    NR_LBD_TR2_like; The ligand binding domain of the orphan nuclear receptors TR4 and TR2
    cd06967
    Location:145 → 231
    NR_DBD_TR2_like; DNA-binding domain of the TR2 and TR4 (human testicular receptor 2 and 4) is composed of two C4-type zinc fingers

  7. XM_046926683.1 → XP_046782639.1  nuclear receptor subfamily 2 group C member 2 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PST3, F1P0B9

  8. XM_046926682.1 → XP_046782638.1  nuclear receptor subfamily 2 group C member 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U2X9

RNA

  1. XR_005853777.2 RNA Sequence

  2. XR_005853776.2 RNA Sequence

  3. XR_005853774.2 RNA Sequence

  4. XR_005853775.2 RNA Sequence

Nucleotide Protein
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