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TCF7L1 transcription factor 7 like 1 [ Gallus gallus (chicken) ]

Gene ID: 395230, updated on 3-Apr-2024

Summary

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Symbol
TCF7L1provided by CGNC
Full Name
transcription factor 7 like 1provided by CGNC
Primary source
CGNC:49223
See related
Ensembl:ENSGALG00010020180
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
TCF3
Orthologs
human mouse all
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Genomic context

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See TCF7L1 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 22 NC_052553.1 (4582024..4597690)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 22 NC_052594.1 (4628175..4643278)

Chromosome 22 - NC_052553.1Genomic Context describing neighboring genes Neighboring gene capping actin protein, gelsolin like Neighboring gene drebrin like Neighboring gene trans-golgi network protein 2 Neighboring gene caspase 14, apoptosis-related cysteine peptidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dynamic expression of Lef/Tcf family members and beta-catenin during chick gastrulation, neurulation, and early limb development. Schmidt M, et al. Dev Dyn, 2004 Mar. PMID 14991726

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of beta-catenin-TCF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor 7 like 1; transcription factor 7-like 1
Names
HMG-box transcription factor Tcf-3
transcription factor 7-like 1 (T-cell specific, HMG-box)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052553.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4582024..4597690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046903453.1 → XP_046759409.1  transcription factor 7-like 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZD64
    Related
    ENSGALP00010028816.1, ENSGALT00010048749.1

  2. XM_015273246.4 → XP_015128732.2  transcription factor 7-like 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZDN0
    Conserved Domains (2) summary
    cd01388
    Location:327 → 398
    SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
    pfam08347
    Location:1 → 232
    CTNNB1_binding; N-terminal CTNNB1 binding

  3. XM_015273247.4 → XP_015128733.2  transcription factor 7-like 1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZDN0, A0A8V0ZJN6
    Related
    ENSGALP00010028813.1, ENSGALT00010048742.1
    Conserved Domains (2) summary
    cd01388
    Location:299 → 370
    SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
    pfam08347
    Location:1 → 232
    CTNNB1_binding; N-terminal CTNNB1 binding

  4. XM_046903454.1 → XP_046759410.1  transcription factor 7-like 1 isoform X4

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052594.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4628175..4643278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046931776.1 → XP_046787732.1  transcription factor 7-like 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZD64

  2. XM_040689653.2 → XP_040545587.2  transcription factor 7-like 1 isoform X6

  3. XM_040689652.2 → XP_040545586.2  transcription factor 7-like 1 isoform X5

Nucleotide Protein
Heading Accession and Version

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