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ID4 inhibitor of DNA binding 4, HLH protein [ Gallus gallus (chicken) ]

Gene ID: 374150, updated on 5-Mar-2024

Summary

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Symbol
ID4provided by CGNC
Full Name
inhibitor of DNA binding 4, HLH proteinprovided by CGNC
Primary source
CGNC:9621
See related
Ensembl:ENSGALG00010006926
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (59459266..59461910, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (59408823..59411473, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121109769 Neighboring gene E2F transcription factor 3 Neighboring gene membrane bound O-acyltransferase domain containing 1 Neighboring gene uncharacterized LOC107051652 Neighboring gene uncharacterized LOC101750019

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Id4 expression and its relationship to other Id genes during avian embryonic development. Kee Y, et al. Mech Dev, 2001 Dec. PMID 11731247

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein inhibitor ID-4
Names
inhibitor of DNA binding 4, dominant negative helix-loop-helix protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001396104.1 → NP_001383033.1  DNA-binding protein inhibitor ID-4 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000040
    UniProtKB/TrEMBL
    Q90X13
    Conserved Domains (1) summary
    cd19694
    Location:43 → 102
    bHLH_dnHLH_ID4; basic helix-loop-helix (bHLH) domain found in DNA-binding protein inhibitor ID4 and similar proteins

  2. NM_204282.2 → NP_989613.1  DNA-binding protein inhibitor ID-4 isoform 2

    See identical proteins and their annotated locations for NP_989613.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000040
    UniProtKB/TrEMBL
    Q90X12, Q90X13
    Related
    ENSGALP00010009348.1, ENSGALT00010016438.1
    Conserved Domains (1) summary
    cd00083
    Location:51 → 94
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    59459266..59461910 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    59408823..59411473 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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