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celf2 cugbp, Elav-like family member 2 [ Danio rerio (zebrafish) ]

Gene ID: 373117, updated on 27-Mar-2024

Summary

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Official Symbol
celf2provided by ZNC
Official Full Name
cugbp, Elav-like family member 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-030826-35
See related
Ensembl:ENSDARG00000002131 AllianceGenome:ZFIN:ZDB-GENE-030826-35
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
Etr-3; cb906; cugbp2; fj87b07; wu:fj87b07
Summary
Predicted to enable mRNA 3'-UTR binding activity. Predicted to be involved in mRNA splice site selection and regulation of alternative mRNA splicing, via spliceosome. Predicted to act upstream of or within mRNA processing. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytoplasm and nucleus. Is expressed in immature eye; musculature system; nervous system; and neural tube. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy. Orthologous to human CELF2 (CUGBP Elav-like family member 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (23881595..24117063, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (24160620..24396077, complement)

Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene USP6 N-terminal like Neighboring gene carboxypeptidase M Neighboring gene GATA binding protein 3 Neighboring gene TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Regulation of alternative splicing of alpha-actinin transcript by Bruno-like proteins. Suzuki H, et al. Genes Cells, 2002 Feb. PMID 11895477
  2. Isolation and expression of Napor/CUG-BP2 in embryo development. Choi DK, et al. Biochem Biophys Res Commun, 2003 Jun 6. PMID 12763013
  3. Conserved functions of RNA-binding proteins in muscle. Nikonova E, et al. Int J Biochem Cell Biol, 2019 May. PMID 30818081
  4. Triclosan regulates alternative splicing events of nerve-related genes through RNA-binding protein CELF2 to induce zebrafish neurotoxicity. Wang D, et al. J Hazard Mater, 2021 Jul 5. PMID 33621777
  5. Analysis of novel caudal hindbrain genes reveals different regulatory logic for gene expression in rhombomere 4 versus 5/6 in embryonic zebrafish. Ghosh P, et al. Neural Dev, 2018 Jun 26. PMID 29945667, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Cloning and expression of Napor/CUG-BP2 in embryo development.
    Title: Isolation and expression of Napor/CUG-BP2 in embryo development.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables mRNA 3'-UTR binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within mRNA processing IEA
Inferred from Electronic Annotation
more info
  
involved_in mRNA splice site recognition IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of alternative mRNA splicing, via spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
part_of ribonucleoprotein complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
CUGBP Elav-like family member 2
Names
CELF-2
CUG triplet repeat RNA-binding protein 2
CUG-BP- and ETR-3-like factor 2
CUG-BP2
ELAV-type RNA-binding protein 3
RNA-binding protein BRUNOL-3
bruno-like protein 3
napor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_194401.1 → NP_919382.1  CUGBP Elav-like family member 2

    See identical proteins and their annotated locations for NP_919382.1

    Status: PROVISIONAL

    Source sequence(s)
    AB050496
    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    Related
    ENSDARP00000122415.1, ENSDART00000132615.3
    Conserved Domains (4) summary
    cd12631
    Location:15 → 98
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:107 → 187
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:394 → 485
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    TIGR01661
    Location:18 → 481
    ELAV_HUD_SF; ELAV/HuD family splicing factor

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007115.7 Reference GRCz11 Primary Assembly

    Range
    23881595..24117063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021474943.1 → XP_021330618.1  CUGBP Elav-like family member 2 isoform X6

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9PU80
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:445 → 536
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  2. XM_021474939.1 → XP_021330614.1  CUGBP Elav-like family member 2 isoform X2

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9Q087
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:455 → 546
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  3. XM_021474940.1 → XP_021330615.1  CUGBP Elav-like family member 2 isoform X3

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9QB04
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:452 → 543
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  4. XM_017354958.2 → XP_017210447.1  CUGBP Elav-like family member 2 isoform X1

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M6Z5W1
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:456 → 547
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  5. XM_021474938.1 → XP_021330613.1  CUGBP Elav-like family member 2 isoform X1

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M6Z5W1
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:456 → 547
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  6. XM_021474945.1 → XP_021330620.1  CUGBP Elav-like family member 2 isoform X8

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9QB09
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:432 → 523
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  7. XM_021474944.1 → XP_021330619.1  CUGBP Elav-like family member 2 isoform X7

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9Q092
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:436 → 527
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  8. XM_021474954.1 → XP_021330629.1  CUGBP Elav-like family member 2 isoform X17

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9Q0A2
    Conserved Domains (4) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:400 → 491
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cl25887
    Location:303 → 491
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  9. XM_021474949.1 → XP_021330624.1  CUGBP Elav-like family member 2 isoform X12

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9Q097
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:410 → 501
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  10. XM_021474953.1 → XP_021330628.1  CUGBP Elav-like family member 2 isoform X16

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9PU91
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:401 → 492
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  11. XM_021474948.1 → XP_021330623.1  CUGBP Elav-like family member 2 isoform X11

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9PU86
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:411 → 502
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  12. XM_021474942.1 → XP_021330617.1  CUGBP Elav-like family member 2 isoform X5

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9PH20
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:446 → 537
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  13. XM_021474941.1 → XP_021330616.1  CUGBP Elav-like family member 2 isoform X4

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9Q5S6
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:450 → 541
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  14. XM_021474956.1 → XP_021330631.1  CUGBP Elav-like family member 2 isoform X19

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9Q5T3
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:390 → 481
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  15. XM_021474955.1 → XP_021330630.1  CUGBP Elav-like family member 2 isoform X18

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9QB19
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:391 → 482
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  16. XM_021474947.1 → XP_021330622.1  CUGBP Elav-like family member 2 isoform X10

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9PH22
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:426 → 517
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  17. XM_021474946.1 → XP_021330621.1  CUGBP Elav-like family member 2 isoform X9

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9Q5S8
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:430 → 521
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  18. XM_021474951.1 → XP_021330626.1  CUGBP Elav-like family member 2 isoform X14

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9Q5T1
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:404 → 495
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  19. XM_021474950.1 → XP_021330625.1  CUGBP Elav-like family member 2 isoform X13

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9QB14
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:405 → 496
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  20. XM_021474959.1 → XP_021330634.1  CUGBP Elav-like family member 2 isoform X21

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9PU94
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:385 → 476
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  21. XM_021474958.1 → XP_021330633.1  CUGBP Elav-like family member 2 isoform X21

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9PU94
    Conserved Domains (3) summary
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:385 → 476
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  22. XM_021474952.1 → XP_021330627.1  CUGBP Elav-like family member 2 isoform X15

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9PH27
    Conserved Domains (3) summary
    cd12631
    Location:61 → 144
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:153 → 233
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:466 → 557
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  23. XM_021474962.1 → XP_021330637.1  CUGBP Elav-like family member 2 isoform X24

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9PH35
    Conserved Domains (3) summary
    cd12631
    Location:61 → 144
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:153 → 233
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:391 → 482
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  24. XM_021474960.1 → XP_021330635.1  CUGBP Elav-like family member 2 isoform X22

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9QB24
    Related
    ENSDARP00000112156.2, ENSDART00000128368.3
    Conserved Domains (3) summary
    cd12631
    Location:61 → 144
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:153 → 233
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:440 → 531
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  25. XM_005164862.4 → XP_005164919.1  CUGBP Elav-like family member 2 isoform X24

    See identical proteins and their annotated locations for XP_005164919.1

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9PH35
    Related
    ENSDARP00000025183.9, ENSDART00000017443.9
    Conserved Domains (3) summary
    cd12631
    Location:61 → 144
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:153 → 233
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:391 → 482
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  26. XM_005164864.4 → XP_005164921.1  CUGBP Elav-like family member 2 isoform X25

    See identical proteins and their annotated locations for XP_005164921.1

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9PU99
    Conserved Domains (3) summary
    cd12631
    Location:47 → 130
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:139 → 219
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:381 → 472
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  27. XM_005164860.4 → XP_005164917.1  CUGBP Elav-like family member 2 isoform X23

    See identical proteins and their annotated locations for XP_005164917.1

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M2BC67, Q4U0V5
    Related
    ENSDARP00000072392.4, ENSDART00000077926.6
    Conserved Domains (3) summary
    cd12631
    Location:47 → 130
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:139 → 219
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:401 → 492
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  28. XM_021474957.1 → XP_021330632.1  CUGBP Elav-like family member 2 isoform X20

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9PH30
    Conserved Domains (3) summary
    cd12631
    Location:47 → 130
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:139 → 219
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:452 → 543
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  29. XM_021474961.1 → XP_021330636.1  CUGBP Elav-like family member 2 isoform X23

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M2BC67, Q4U0V5
    Conserved Domains (3) summary
    cd12631
    Location:47 → 130
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:139 → 219
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:401 → 492
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  30. XM_021474963.1 → XP_021330638.1  CUGBP Elav-like family member 2 isoform X25

    UniProtKB/Swiss-Prot
    Q4U0V4, Q4U0V6, Q6P0B1, Q8QGX2, Q90ZV0
    UniProtKB/TrEMBL
    A0A8M9PU99
    Conserved Domains (3) summary
    cd12631
    Location:47 → 130
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:139 → 219
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:381 → 472
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395232.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    243510..318780 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6P0B1.1 GenPept UniProtKB/Swiss-Prot:Q6P0B1

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