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Orc3 Origin recognition complex subunit 3 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36454, updated on 4-Apr-2024

Summary

Official Symbol
Orc3provided by FlyBase
Official Full Name
Origin recognition complex subunit 3provided by FlyBase
Primary source
FLYBASE:FBgn0005654
Locus tag
Dmel_CG4088
See related
AllianceGenome:FB:FBgn0005654
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG4088; Dmel\CG4088; DmOrc3; DmORC3; l(2)49Fd; l(2)vr6; lat; Lat; LAT; latheo; ORC; orc3; ORC3; vr-6; vr6
Summary
Predicted to enable DNA replication origin binding activity. Involved in DNA replication initiation and positive regulation of border follicle cell migration. Part of nuclear origin of replication recognition complex. Is expressed in adult brain; bouton; centripetal follicle cell; egg chamber; and neuromuscular junction. Orthologous to human ORC3 (origin recognition complex subunit 3). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
49F7-49F8; 2-68 cM
Exon count:
9
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (13202728..13206547, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (9090233..9094052, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Lysine demethylase 4B Neighboring gene sequoia Neighboring gene Valyl-tRNA synthetase Neighboring gene uncharacterized protein Neighboring gene FLICE-associated huge protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene aquaporin

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA binding NAS
Non-traceable Author Statement
more info
PubMed 
enables DNA replication origin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables ribonucleoprotein complex binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 
involved_in DNA replication NAS
Non-traceable Author Statement
more info
PubMed 
involved_in DNA replication initiation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in DNA replication initiation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in larval feeding behavior NAS
Non-traceable Author Statement
more info
PubMed 
involved_in learning NAS
Non-traceable Author Statement
more info
PubMed 
involved_in learning or memory NAS
Non-traceable Author Statement
more info
PubMed 
involved_in olfactory learning TAS
Traceable Author Statement
more info
PubMed 
involved_in positive regulation of border follicle cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
part_of DNA replication preinitiation complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of nuclear origin of replication recognition complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of nuclear origin of replication recognition complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of nuclear origin of replication recognition complex IEA
Inferred from Electronic Annotation
more info
 
part_of nuclear pore IDA
Inferred from Direct Assay
more info
PubMed 
part_of nuclear pre-replicative complex IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
origin recognition complex subunit 3
Names
CG4088-PA
CG4088-PB
Orc3-PA
Orc3-PB
latheo

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    13202728..13206547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_057556.6NP_476904.1  origin recognition complex subunit 3, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_476904.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7K2L1, Q9Y1B4
    Related
    FBpp0086881
    Conserved Domains (2) summary
    pfam07034
    Location:26334
    ORC3_N; Origin recognition complex (ORC) subunit 3 N-terminus
    cd20704
    Location:589721
    Orc3; Origin recognition complex subunit 3
  2. NM_165971.2NP_725260.1  origin recognition complex subunit 3, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_725260.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7K2L1, Q9Y1B4
    Related
    FBpp0086882
    Conserved Domains (2) summary
    pfam07034
    Location:26334
    ORC3_N; Origin recognition complex (ORC) subunit 3 N-terminus
    cd20704
    Location:589721
    Orc3; Origin recognition complex subunit 3