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Polr3B RNA polymerase III subunit B [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36289, updated on 4-Apr-2024

Summary

Official Symbol
Polr3Bprovided by FlyBase
Official Full Name
RNA polymerase III subunit Bprovided by FlyBase
Primary source
FLYBASE:FBgn0004463
Locus tag
Dmel_CG8344
See related
AllianceGenome:FB:FBgn0004463
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
C128; CG8344; Dmel\CG8344; DmRP128; RET1; RP128; RpIII128
Summary
Predicted to enable DNA binding activity and ribonucleoside binding activity. Predicted to contribute to RNA polymerase III activity. Predicted to be involved in tRNA transcription by RNA polymerase III. Predicted to be part of RNA polymerase III complex. Is expressed in spermatozoon. Human ortholog(s) of this gene implicated in hypomyelinating leukodystrophy 8 with or without oligodontia and-or hypogonadotropic hypogonadism. Orthologous to human POLR3B (RNA polymerase III subunit B). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Polr3B in Genome Data Viewer
Location:
48D8-48D8; 2-65 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12039041..12042623)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (7926546..7930128)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene upstream of RpIII128 Neighboring gene DNA fragmentation factor-related protein 1 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 
contributes_to RNA polymerase III activity IBA
Inferred from Biological aspect of Ancestor
more info
 
contributes_to RNA polymerase III activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables ribonucleoside binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
involved_in tRNA transcription by RNA polymerase III ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of RNA polymerase III complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of RNA polymerase III complex ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
RNA polymerase III subunit B
Names
CG8344-PA
Polr3B-PA
RNA polymerase III
RNA polymerase III 128kD subunit
RNA polymerase IIIb
NP_523706.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    12039041..12042623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_078982.3NP_523706.1  RNA polymerase III subunit B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_523706.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P25167, Q8MRD5, Q9V649
    Related
    FBpp0087085